VIMSS5927161 has 619 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-259 848.1 1.7 1.6e-259 847.9 1.7 1.0 1 VIMSS5927161
Domain annotation for each sequence (and alignments):
>> VIMSS5927161
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 847.9 1.7 1.6e-259 1.6e-259 2 542 .. 18 613 .. 17 614 .. 0.98
Alignments for each domain:
== domain 1 score: 847.9 bits; conditional E-value: 1.6e-259
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
ar+l++atG+kd+d++kPiiavvns+t++vPghvhlkdl++lv++eieaaGgvakefntiav+DGiamgh+Gm+ysLpsr+iiaDsve++v+ah++D
VIMSS5927161 18 ARSLWRATGMKDDDFSKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRDIIADSVEYMVNAHCAD 114
69*********************************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktkl......sekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansma 189
a+v+is+CDki+PGmlmaa+rlniP+i+vsGGpmeagkt+l + +++++d+++a++ +a++ s++++ e+ersacPt+gsCsG+ftansm+
VIMSS5927161 115 AMVCISNCDKITPGMLMAAMRLNIPVIFVSGGPMEAGKTRLanpvtkTVELKKLDLVDAMVIAADQSYSDADVAEVERSACPTCGSCSGMFTANSMN 211
****************************************97777555677899******************************************* PP
TIGR00110 190 cltealGlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfd 279
cltealGlslPg++t+ at+a++++l+k++g+rivel++++++ Pr++ +afena+tld+a+GGstnt+Lhllaia+eag++++++d+d
VIMSS5927161 212 CLTEALGLSLPGNGTVVATHADREQLFKRAGRRIVELTRQHYEqddervlPRSV-GFKAFENAMTLDIAMGGSTNTILHLLAIAQEAGIDFTMKDID 307
*******************************************99999999986.589*************************************** PP
TIGR00110 280 rlsrkvPllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr............................... 344
rlsr+vP+l+k++P+++k+ ied+hraGG++a+l+el+++g+lh+d+ tv tl++ l++ ++
VIMSS5927161 308 RLSRTVPQLCKVAPNTNKYhIEDVHRAGGIMAILGELERAGKLHTDVPTVHAPTLKDALDQWDIVLtqddavrtfylagpagiptqvafsqntrwps 404
******************99*******************************************99999***************************** PP
TIGR00110 345 ....vdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPt 437
+ +irs +++++kegglavL+Gn+a +G+vvk+agv+e+il+feG+a+v es++ea+e il+ kvk+Gdvv++ryeGPkGgPGm+emL+Pt
VIMSS5927161 405 ldldRAEGCIRSYEHAFSKEGGLAVLTGNIALDGCVVKTAGVDESILVFEGSAHVTESQDEAVENILNDKVKAGDVVIVRYEGPKGGPGMQEMLYPT 501
88655555***************************************************************************************** PP
TIGR00110 438 salvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLak 527
s++++ GLgk++aL+tDGrfsGgt+GlsiGh sPeaa+gGai+lv+dGD+i+iDi+nr++d+ vs+eela+rr+++++k++ r+v+ aL++
VIMSS5927161 502 SYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAGGAIGLVRDGDRIRIDIPNRTIDVLVSDEELARRREEQNAKGWkpaqprpRKVSAALKA 598
********************************************************************************999***99********* PP
TIGR00110 528 yaklvssadkGavld 542
yaklv sadkGav+d
VIMSS5927161 599 YAKLVMSADKGAVRD 613
*************97 PP
Or compare VIMSS5927161 to CDD or PaperBLAST