PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS5928109 to PF07369 (DUF1488)

VIMSS5928109 has 95 amino acids

Query:       DUF1488  [M=82]
Accession:   PF07369.16
Description: Protein of unknown function (DUF1488)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-26   78.1   0.2    2.7e-26   77.8   0.2    1.1  1  VIMSS5928109  


Domain annotation for each sequence (and alignments):
>> VIMSS5928109  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.2   2.7e-26   2.7e-26       1      75 [.       3      78 ..       3      82 .. 0.95

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 2.7e-26
       DUF1488  1 IqFpdr.esydaarqaVrFpalvdgeeveCaisaeaLedhfgaeslaeedllaaFdqhRfdieevaerlieaegfd 75
                  I+F+++ ++y  ++  + F alv+ge+v+C i+aeaLedhfga+s + ed++ aFdqhR++ie++a+rl+ +++++
  VIMSS5928109  3 IHFTNEkPEYSGRDLMLGFTALVNGERVQCQITAEALEDHFGAASPRFEDMVGAFDQHRERIEAAARRLLSETRAQ 78
                  89********************************************************************888776 PP



Or compare VIMSS5928109 to CDD or PaperBLAST