VIMSS59872 has 585 amino acids
Query: DUF1302 [M=534]
Accession: PF06980.15
Description: Protein of unknown function (DUF1302)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-184 599.2 13.0 5.7e-184 599.0 13.0 1.0 1 VIMSS59872
Domain annotation for each sequence (and alignments):
>> VIMSS59872
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 599.0 13.0 5.7e-184 5.7e-184 3 534 .] 12 585 .] 10 585 .] 0.96
Alignments for each domain:
== domain 1 score: 599.0 bits; conditional E-value: 5.7e-184
DUF1302 3 alllaalaallaaspaqAveseeddgvqgsldttlsygagvrtedrdpsligkanggaaasangddGnlnfdkgdlvsnrlkatseldlkygnygffvr 101
++laa++al++a++a+Av s++ ++++g++d++ls+ga++ + ++d++ ig+ ngg a s ++ddG+lnf+kg+++s+ +k+ ++l+lkyg+ g+f+r
VIMSS59872 12 LHALAAATALGCATQASAV-SFNIGEIEGQFDSSLSVGASWSMRSADKDYIGTRNGGHASSQTSDDGRLNFKKGETFSKIFKGIHDLELKYGDTGAFFR 109
5799***************.******************************************************************************* PP
DUF1302 102 gkafyDavydnknedesnattnanggagngdsddardeagrgaelldayvygsfdlgdrplsvRlGrQvvnWGeslfvlnGinainplDvsklrrPGae 200
gk++yD++++++++ ++ +d + ++ ++ +ga+llda++y+++ +gd p svR+G+Qvv+WGes+f++n+in+inp+Dv+++rrPGae
VIMSS59872 110 GKYWYDFELKDEHRLLYDI----------DDHNRKEGAKSSGAQLLDAFLYHNYSIGDLPGSVRVGKQVVSWGESTFIQNSINSINPMDVAAFRRPGAE 198
***********99997644..........34788999999*********************************************************** PP
DUF1302 201 lkeallPvpmvsaslqltdglsleafyqfeweptrlppvGtFfstsdivgpggeglllatgnaaaltgsaagtvvpraadkepsdsgqwGlalrylaee 299
+ke l+Pv+m+++s +++d l++e+fyq+ew++t+++++GtFfst+d+v++g+e++++a++ ++ + ++ +++pra+d++++dsgqwGlalr++a e
VIMSS59872 199 IKEGLIPVNMLYLSQGISDALTVEGFYQLEWDQTVIDNCGTFFSTTDVVADGCERMVYAGSDFDPN-PANGYRYLPRAGDRDARDSGQWGLALRWYAAE 296
********************************************************9999887666.367889**********************9999 PP
DUF1302 300 ...tefglyylnyhsrlPvls.........asaavdadnaayfleYpediklfGaSfnttlggdtavagEvsyrpnaplqvdtadllaaalaptape.. 384
tefgly++nyhsr+P+ s ++++ +++ yf++Ypedi+l+G+Sf t++g +t+vagE+syrpn+plq++++d+ +aa+ pt+ +
VIMSS59872 297 lndTEFGLYAMNYHSRNPYYSviagnglatSDPVTGRSTGYYFIDYPEDIRLYGLSFQTNIG-STSVAGELSYRPNMPLQINSTDMSIAAIYPTTLFgn 394
9***************************98777788888999*******************6.******************************9999** PP
DUF1302 385 .............eyvrgyergdvlqaqlg........lgadsltlvaEvavthvpdlpdde.......................saagnaagcaadgy 439
e ++gy+r+ v+qaq++ l+ad lt+v+Ev+++h+ +++ d+ +n+++c++ g+
VIMSS59872 395 piydsgfatpragEVINGYVRKPVTQAQVTvtqffdrvLAADRLTVVGEVGYNHLSGVDGDDlrygrdaiygigelpnnalctgaLNVANPQECNSHGF 493
******************************99999999778*********************************999999999876677788******* PP
DUF1302 440 atrfswGyrlrlsltyndvlpgldlspslsfshdvkGnspdagfvegrksvslgltadyqskwsvdlgytaffggddrnplaDrDfvslsvkysF 534
+tr+swGyrlr l+y++v++g++l+p+l++shdv+G++p+ + eg+k+vs+gl adyq++++++++yt ffgg++ np++DrDf+++s++ +F
VIMSS59872 494 YTRNSWGYRLRGILEYPNVFAGVNLKPNLAWSHDVEGYGPNFS--EGAKAVSVGLDADYQNTYTASISYTDFFGGNY-NPINDRDFLAVSFGVNF 585
****************************************888..9******************************7.9*************999 PP
Or compare VIMSS59872 to CDD or PaperBLAST