VIMSS60488 has 600 amino acids
Query: ABC_transp_aux [M=266]
Accession: PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-69 220.1 0.0 2.7e-69 219.7 0.0 1.2 1 VIMSS60488
Domain annotation for each sequence (and alignments):
>> VIMSS60488
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 219.7 0.0 2.7e-69 2.7e-69 2 264 .. 34 291 .. 33 293 .. 0.93
Alignments for each domain:
== domain 1 score: 219.7 bits; conditional E-value: 2.7e-69
ABC_transp_aux 2 lDlTedkrytLseatkellksleepvtitvylsgdl..lpaelkrlqkevrelLeeyaaysngkikvefidpeeeseeeeeaeallgiqpteiev 94
+DlT++k+yt s +t+e+l+sl+ep+++++++s++ + ++l++++++v+e+L+ ya++s+g++++ +idp+++s++e++a++ +g+q+ +i
VIMSS60488 34 FDLTQQKLYTFSAGTQEVLDSLDEPLNLYLFFSKSRasDLPALRNYARRVEEVLDLYARRSHGNVRLFVIDPLPFSDDEDRAAR-FGLQAPPIGP 127
9*************************************889*****************************************99.7********* PP
ABC_transp_aux 95 eengkssqervypgavis.ygdkeevipllknnseenlEyeltsaikkltkkekpkigvlt.....ghgelsds........seladlleelsen 175
++ e +y+g++++ +d +vip++++++e lEy+l+++++ l++ e+ ++g+++ g + s+ ++++++l ++
VIMSS60488 128 NG------EAIYFGLAATnPTDGLQVIPFFSPEEEPLLEYDLSRLVQALAQRERTVVGLMSslpmtG------QaptdgqpgSRPWAMMDKLYQQ 210
*8......99*****99989999*************************************9676432......123336788677********** PP
ABC_transp_aux 176 yeveevdldseaelpeevdvlviakptkalseeekyaldqflmnGgkllvlldpvaveldslkealaaprdsnledlLekyGvrinpdl 264
++++++ l+s+++ p+ev+vl+++ ++++lse+++ya+dqf+++Ggkll+++dp++ ++ ++s+l +lL ++Gv+++pd
VIMSS60488 211 FDIRTLGLASTEI-PAEVSVLMLV-HPRQLSEQTQYAIDQFVLRGGKLLAFVDPLSLADA------DGGKSSDLAPLLRSWGVQLRPDT 291
*********9998.9*********.*******************************8883......34579***************996 PP
Or compare VIMSS60488 to CDD or PaperBLAST