VIMSS61079 has 192 amino acids
Query: UPF0016 [M=75]
Accession: PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.4e-48 147.4 22.7 5.1e-27 80.4 6.7 2.1 2 VIMSS61079
Domain annotation for each sequence (and alignments):
>> VIMSS61079
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 73.3 8.0 8.5e-25 8.5e-25 4 75 .] 8 80 .. 5 80 .. 0.97
2 ! 80.4 6.7 5.1e-27 5.1e-27 1 75 [] 103 178 .. 103 178 .. 0.98
Alignments for each domain:
== domain 1 score: 73.3 bits; conditional E-value: 8.5e-25
UPF0016 4 flliflaElGDkTqlatiaLAary.kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
+l+++laE+GDkTql++++LAar+ kp+++++G+++A++++++ a ++G+++a++++e +++++ a++F++++
VIMSS61079 8 TLIVALAEIGDKTQLLALLLAARFrKPWPIIAGIVAATLANHFAAGAVGAWVASFFSEATLSWILAASFIAVA 80
6789******************************************************************976 PP
== domain 2 score: 80.4 bits; conditional E-value: 5.1e-27
UPF0016 1 ltsflliflaElGDkTqlatiaLAary.kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
lt+++++flaE+GDkTq+at++LAa+y +++ V++G+tl++++a+++ vl+G+l a++lp +l++++aa++F+++G
VIMSS61079 103 LTTLIAFFLAEMGDKTQVATVMLAAQYpHFWLVVIGTTLGMLIANVPVVLIGNLAADKLPLTLIRRLAAAAFAALG 178
6899*********************************************************************998 PP
Or compare VIMSS61079 to CDD or PaperBLAST