VIMSS62574 has 617 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-241 788.8 3.4 1.5e-241 788.6 3.4 1.0 1 VIMSS62574
Domain annotation for each sequence (and alignments):
>> VIMSS62574
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 788.6 3.4 1.5e-241 1.5e-241 2 542 .. 18 610 .. 17 611 .. 0.99
Alignments for each domain:
== domain 1 score: 788.6 bits; conditional E-value: 1.5e-241
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDal 100
ar+l++atG++++d++kPiiavvns++++vPgh+hl++++kl+ ei+++Ggvakefntia++DGiamgh+Gm+ysLpsre+iaDs+e+vv+ah++Da+
VIMSS62574 18 ARSLWRATGMTEKDFTKPIIAVVNSFSQFVPGHIHLQEVGKLICGEIQKSGGVAKEFNTIAIDDGIAMGHSGMLYSLPSRELIADSIEYVVNAHCADAM 116
69************************************************************************************************* PP
TIGR00110 101 vvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGlsl 199
++is+CDki+PGmlma+lrlniP++++sGGpmeagk++ +k +++d+++a+++ ++++s++ +++ie sacPt+gsCsG+ftansm+cltea+Gl+l
VIMSS62574 117 ICISNCDKITPGMLMASLRLNIPSVFISGGPMEAGKIQKNNKTIKIDLVDAIINGGKSHISDDFIKDIEASACPTCGSCSGMFTANSMNCLTEAIGLAL 215
*************************************************************************************************** PP
TIGR00110 200 Pgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllakl 291
Pg++tllat+ ++k+l+ ks++ iv++++ ++k Pr+i++ke+fena++ld+a+GGstnt+Lhlla+a+ea+v+++++++++ls+k+P+++k+
VIMSS62574 216 PGNGTLLATHIDRKNLFIKSAQIIVKITEDYYKknntnvlPRNIANKESFENAMMLDIAMGGSTNTILHLLAAAQEAKVDFKMSNINKLSKKIPHICKV 314
********************************99***************************************************************** PP
TIGR00110 292 kPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdqdvirsld 354
+Ps++ + +ed+hraGGv+++l+el++ +llhk++ +++ l+etl+++++ ++ +irs +
VIMSS62574 315 APSTSLYhVEDVHRAGGVMGILGELNRFNLLHKNTRNILQLNLEETLDEYDIFStnnpdvinmfqagpggirttkaysqnfrwtrldydRKNGCIRSCK 413
*****999********************************************9999*****************************66555555****** PP
TIGR00110 355 npvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLit 453
++++++ggla+L+Gnla++G+++k+ag++ + + f G akv+es+eea +il+g++ Gd++viryeGPkGgPGm+emL+Pt++l+++ L+k++aLit
VIMSS62574 414 HAYSQDGGLAILYGNLAKNGCIIKTAGIDAKNYIFSGVAKVYESQEEAASSILNGEIISGDIIVIRYEGPKGGPGMQEMLYPTTYLKSMNLDKTCALIT 512
*************************************************************************************************** PP
TIGR00110 454 DGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyaklvssadkGavld 542
DGrfsGgt+G+siGh+sPeaa+ G ialv++GD+i+i+i++r+++l++ e+el +r + ++k++ r+++ aL++ya + +sad+Gav+d
VIMSS62574 513 DGRFSGGTSGISIGHISPEAANKGIIALVKNGDIININIPERTIHLNITEKELSHRILQEESKGPlsykphsrkRYISSALKAYAFFSTSADQGAVRD 610
*********************************************************9999999999******99*********************98 PP
Or compare VIMSS62574 to CDD or PaperBLAST