VIMSS659780 has 560 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-237 775.1 8.3 2e-237 774.9 8.3 1.0 1 VIMSS659780
Domain annotation for each sequence (and alignments):
>> VIMSS659780
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 774.9 8.3 2e-237 2e-237 1 542 [. 20 558 .. 20 559 .. 1.00
Alignments for each domain:
== domain 1 score: 774.9 bits; conditional E-value: 2e-237
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++ra+l+a+G++ded++kP+i+++++++ei+P+++h+++la++vke++++aGgv++ ++ti+vsDGi mgheGm++sLpsre+iaDs+e v +a + D
VIMSS659780 20 PNRAMLRAVGFTDEDFHKPMIGIASTWSEITPCNIHINKLAEKVKEGVREAGGVPQIYGTITVSDGIMMGHEGMHFSLPSREVIADSIEIVSNAMRHD 117
68************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
++++i+ CDk++PG lma r++ P+i+v+GG++ +g+ ++++d+v++feavg+ +agk+s ee +ie++a P+agsC+G++tan+m+++ ealG
VIMSS659780 118 GVIAIGGCDKNMPGCLMALCRIDAPSIFVYGGTILPGNCD-GQDVDIVSIFEAVGKFNAGKISREEFIRIEQNAIPGAGSCGGMYTANTMSSAIEALG 214
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
+slPgs++++a+s++k++ + ++gk +++l++k i+P++iltk+afenait++l+lGGstn+vLhl+aiake+gv l+lddfdr+s+k+P+la+lkP+
VIMSS659780 215 MSLPGSASMPAVSSRKANDCYEAGKALINLIQKGITPKQILTKKAFENAITVVLVLGGSTNAVLHLIAIAKEIGVGLTLDDFDRISKKTPHLADLKPG 312
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGp 392
gk+ ++dl+++GGv++v+k+l keg+lh d+ltvtGkt+ae+l++++ l +q ++r+++++++ g l +LkGnla++Gav+ki+g ++ + ++Gp
VIMSS659780 313 GKYAMTDLDKVGGVHGVMKYLLKEGMLHGDCLTVTGKTIAENLKDMPDLVPNQTIVRKKSEALHPSGPLVILKGNLAPDGAVAKISGLKK--ISITGP 408
*************************************************99***************************************..99**** PP
TIGR00110 393 akvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkiki 490
akvfese+++ +ai++ k+k Gdv++iryeGPkGgPGmremLa tsalvg GLg++v+L+tDGrfsGgt+Gl++Gh+sPea gG+ia++++GDk++i
VIMSS659780 409 AKVFESEDDCFNAIMTDKIKPGDVIIIRYEGPKGGPGMREMLAVTSALVGKGLGEDVGLMTDGRFSGGTHGLVVGHISPEAFDGGPIAIIQNGDKVTI 506
************************************************************************************************** PP
TIGR00110 491 DienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
D +++ l++e+s+ee+++r +++k+ e+r++ g+Laky klv+sa +Ga+++
VIMSS659780 507 DSSKNLLQVEISQEEIDKRLKSWKPIEPRYKTGVLAKYVKLVQSATNGAITN 558
*************************************************975 PP
Or compare VIMSS659780 to CDD or PaperBLAST