VIMSS66079 has 133 amino acids
Query: UPF0047 [M=117]
Accession: PF01894.22
Description: Uncharacterised protein family UPF0047
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-45 139.4 0.2 3.4e-45 139.2 0.2 1.0 1 VIMSS66079
Domain annotation for each sequence (and alignments):
>> VIMSS66079
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 139.2 0.2 3.4e-45 3.4e-45 1 116 [. 16 129 .. 16 130 .. 0.97
Alignments for each domain:
== domain 1 score: 139.2 bits; conditional E-value: 3.4e-45
E-HHHHHHHHHHHT-SEEEEEEEESSSSEEEEEEESSSHHHHHHHHHHHHHHSTTTS.T-GGGTTS..THHHHHHHHHH-SEEEEEEETTEE---TTEE CS
UPF0047 1 diteeveeavkesgikeGlvlvfvphttaaltinEnadpdvrkDleealeklvpede.eyrhnaegednadaHlkssllgssltipvedgklalGtwqg 98
dit+++e++++e+g+++G+++v + htta++t+nEnadpdv++D+ + l++++p+++ + rh+ eg n++aHlk+s++g+ +t+++++g+l+lGtwqg
VIMSS66079 16 DITSQIETWIRETGVTNGVAIVSSLHTTAGITVNENADPDVKRDMIMRLDEVYPWHHeNDRHM-EG--NTAAHLKTSTVGHAQTLIISEGRLVLGTWQG 111
7*****************************************************996588888.99..******************************* PP
EEEEESS-SSEEEEEEEE CS
UPF0047 99 iylvEfdgpreeRkvvvk 116
+y++Efdgpr++Rk+vvk
VIMSS66079 112 VYFCEFDGPRTNRKFVVK 129
****************98 PP
Or compare VIMSS66079 to CDD or PaperBLAST