VIMSS661951 has 675 amino acids
Query: ABC_transp_aux [M=266]
Accession: PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-22 65.2 0.1 1e-21 63.6 0.1 1.8 1 VIMSS661951
Domain annotation for each sequence (and alignments):
>> VIMSS661951
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 63.6 0.1 1e-21 1e-21 2 234 .. 175 415 .. 174 434 .. 0.84
Alignments for each domain:
== domain 1 score: 63.6 bits; conditional E-value: 1e-21
ABC_transp_aux 2 lDlTedkrytLseatkellksleepvtitvylsgdl.........lpaelkrlqkevrelLeeyaaysngkikvefidpeeeseeeeeaeallgi 87
+Dl+++++y+ s+a+ ++lk+++++v + +++ + l +l+r++ +++ +L+++++ s+ ++kv+fi+ + e +e ++ +g
VIMSS661951 175 FDLSSKGQYSFSPAAIKILKNVNKEVDVVAFYPRPLenspssekaNSFSLRRIRPDLEIYLDQLKSLSP-QFKVRFINADVEL---DELAE-FGQ 264
8*******************************999999999998866689999**************99.*********7644...44444.344 PP
ABC_transp_aux 88 qpteieveengkssqervypgavis.ygdkeevipllknnseenlEyeltsaikkltkkekpkigvltghgelsds.......seladlleelse 174
+ + + +++ + a ++ ++ e+ +++ ++n+ e lE ++++a+ ++t++e ++i++ + +ge+ + +++ l ++ls
VIMSS661951 265 VSNGVILLR----TKKPL---AEVTgKQYAEQRLSIREKNDLEDLERKIVQAVVNITTEE-KNIYFTQSNGERFSPifqnlpnEKVGILSNSLSF 351
443322222....22333...55555666677777778888999***************9.***********987799***98666777799999 PP
ABC_transp_aux 175 .nyeveevdldseae..lpeevdvlviakptkalseeekyaldqflmn.Ggkllvlldpvavel 234
n++v+ + ++++ +pe+ dvl+ia+pt a+s+e++ l +f+++ gk+++ +dp e+
VIMSS661951 352 lNFKVKGLGIAEGWPtrIPEDADVLMIAGPTVAFSKEAQSSLIDFVEKkKGKIFITIDPKGTEN 415
**********99887889****************************86279*******987665 PP
Or compare VIMSS661951 to CDD or PaperBLAST