VIMSS6629506 has 246 amino acids
Query: DUF92 [M=251]
Accession: PF01940.21
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.8e-59 185.3 0.4 7.8e-59 185.1 0.4 1.0 1 VIMSS6629506
Domain annotation for each sequence (and alignments):
>> VIMSS6629506
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 185.1 0.4 7.8e-59 7.8e-59 48 249 .. 2 235 .. 1 237 [. 0.82
Alignments for each domain:
== domain 1 score: 185.1 bits; conditional E-value: 7.8e-59
DUF92 48 fllgsllTkvkkeeKakaklaeek.....egaRgavqVlanglvalllallyallel........skella....lssllllgfvaslaaalaDTla 127
+l+gs++Tkvk+++Kak l+++ +g+R+++qVla++l +l++ally + ls+ l++ ++ a+ laDTla
VIMSS6629506 2 YLIGSRATKVKADVKAK--LEDGPdpsksGGNRTWIQVLASSLPGLVAALLYRFGPAsqldkanvV----LslhpLSRPLIYTSLGLNATILADTLA 92
89**************5..4444333444677*******************987766887643221....13456889999**************** PP
DUF92 128 SElGkllsk.kprlittlkkvppGtnGgVsllGtlagllGalliallalllll.lak..........qlklillvtlaGllGsllDSllGAtlqasv 212
SElG l+ + +p +i+t+++vppGtnG++s lGt a+++G+++i++++++ ll + + +l+++++ GllGs+lDSllGAtlq+++
VIMSS6629506 93 SELGILS-SlPPLHIITFQRVPPGTNGAISSLGTWASAFGGAAIGITQVIDLLiE-NpacrtsgwtwAGELVAVGASLGLLGSILDSLLGATLQSTY 187
****555.55***********************************9954433341.1345566665577788888888******************* PP
DUF92 213 vdketgkvvek..........kvkesrki.sGldlldNnaVNllstll 249
++ e+++v+++ +v+ +++i G+dll+N+aVN+++ ++
VIMSS6629506 188 YNVEDKRVITDaspnyhtstqRVEGVKRIgGGIDLLSNSAVNFVCGCI 235
*******99997776655554444999999**************9887 PP
Or compare VIMSS6629506 to CDD or PaperBLAST