PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS664905 to PF13349 (DUF4097)

VIMSS664905 has 403 amino acids

Query:       DUF4097  [M=247]
Accession:   PF13349.12
Description: Toastrack DUF4097
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      8e-23   67.1   1.3      8e-23   67.1   1.3    2.2  2  VIMSS664905  


Domain annotation for each sequence (and alignments):
>> VIMSS664905  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   1.3     8e-23     8e-23       4     199 ..     143     342 ..     140     347 .. 0.81
   2 ?   -0.6   0.1     0.037     0.037     114     138 ..     378     402 ..     373     403 .] 0.56

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 8e-23
      DUF4097   4 ieidsesadvtikqserenitveysgskkkkkdak............enggtLtitgkeknatsvgmslssgekteiivyiPkkyledlevklssGdi 89 
                   +i++++ dv i+  ++e+++++++ +  +k +++             +++ L+i+ ++ ++ s     +   kt ++v+iPk  +e+++++l +G++
  VIMSS664905 143 FTIRVATGDVIIRSWDKEQMKIRAVLAVHEKARSIrqlseeklwdyfFSQTMLDISPDNFTFES----KNELLKTDLVVTIPKRLYEQVKIQLLNGNL 236
                  5788888899999999999999998888888877655444443333333333333333333332....56778999********************** PP

      DUF4097  90 slsgdklelkdlalktssGdislkdvkaeelkvkstsGdvsidgseakelklettsGdieleslsgkdldakstsGDikvsntklag.slkitatsGd 186
                  ++   + +++d ++kt  Gdi+ ++++++ l+ +s++G++ +  s ++++++ t+ Gdi l++  ++   ak+  GD++   + ++    +++a  Gd
  VIMSS664905 237 KYD--DTAAEDAIIKTRHGDIRSSGASGKFLSTESADGEIFFKRSTVENVDMSTAKGDIALQGSFLT-TIAKAAQGDVEYILENDTSsASDLEAPNGD 331
                  ***..**********************************************************9999.99********9877555540568******* PP

      DUF4097 187 idlslpesasagv 199
                  i++++p   + +v
  VIMSS664905 332 IRIQIP--PTWNV 342
                  *****9..55555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.037
      DUF4097 114 dvkaeelkvkstsGdvsidgseake 138
                  ++++ +l+ k   G +++++ e+k+
  VIMSS664905 378 EISMATLQAKVGNGIIKVSELETKN 402
                  4555555555555666655555554 PP



Or compare VIMSS664905 to CDD or PaperBLAST