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Align VIMSS664905 to PF13349 (DUF4097)

VIMSS664905 has 403 amino acids

Query:       DUF4097  [M=246]
Accession:   PF13349.10
Description: Putative adhesin
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-23   68.5   4.7    3.7e-23   68.3   1.1    2.5  3  VIMSS664905  


Domain annotation for each sequence (and alignments):
>> VIMSS664905  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.4   0.0    0.0048    0.0048     128     160 ..     133     165 ..     132     168 .. 0.74
   2 !   68.3   1.1   3.7e-23   3.7e-23       4     197 ..     143     341 ..     140     348 .. 0.81
   3 ?   -0.2   0.1     0.029     0.029     112     137 ..     377     402 ..     374     403 .] 0.63

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.0048
      DUF4097 128 vsidgseakklklettsGdvelnsvsgkkldlk 160
                  +++d+ ++ +  ++ + Gdv ++s + ++++++
  VIMSS664905 133 FNFDNATFRSFTIRVATGDVIIRSWDKEQMKIR 165
                  567788888888888888888888888877776 PP

  == domain 2  score: 68.3 bits;  conditional E-value: 3.7e-23
      DUF4097   4 ieInsesadveikesereqisveysgskkkkkdak..enggtLtitgkekngtsvgis................lssfekseiivylPkdyledlevk 83 
                   +I++ + dv i+  ++eq++++++ +  +k +++          ++++ ++++   +                 +   k+ ++v++Pk  +e+++++
  VIMSS664905 143 FTIRVATGDVIIRSWDKEQMKIRAVLAVHEKARSIrqL-------SEEKLWDYF---FsqtmldispdnftfesKNELLKTDLVVTIPKRLYEQVKIQ 230
                  67888888999999999999999998888888764330.......233333333...22235566666554433455668999*************** PP

      DUF4097  84 tssGdisvsdklelkdvklksssGdislknvsaenlkvkstsGdvsidgseakklklettsGdvelnsvsgkkldlkstsGdlkvsn.tkiagslkit 180
                  + +G++++  + +++d+++k+  Gdi+ +++s + l+ +s++G++ +  s+ +++++ t+ Gd+ l+   ++   +k+  Gd++    +  ++  +++
  VIMSS664905 231 LLNGNLKYD-DTAAEDAIIKTRHGDIRSSGASGKFLSTESADGEIFFKRSTVENVDMSTAKGDIALQGSFLT-TIAKAAQGDVEYILeNDTSSASDLE 326
                  *********.*************************************************************9.99********9655144455778** PP

      DUF4097 181 atsGdielslpdsasag 197
                  a  Gdi++++p   + +
  VIMSS664905 327 APNGDIRIQIP--PTWN 341
                  *********99..4444 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.029
      DUF4097 112 knvsaenlkvkstsGdvsidgseakk 137
                  +++s+++l+ k   G ++++++e+k+
  VIMSS664905 377 EEISMATLQAKVGNGIIKVSELETKN 402
                  55666667777777777777666665 PP



Or compare VIMSS664905 to CDD or PaperBLAST