VIMSS678409 has 373 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-16 46.8 0.0 4.1e-16 45.0 0.0 1.8 2 VIMSS678409
Domain annotation for each sequence (and alignments):
>> VIMSS678409
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.3 0.0 0.15 0.15 51 66 .. 64 79 .. 57 82 .. 0.87
2 ! 45.0 0.0 4.1e-16 4.1e-16 41 151 .. 138 236 .. 124 239 .. 0.86
Alignments for each domain:
== domain 1 score: -2.3 bits; conditional E-value: 0.15
PDH_N 51 lavPvevilevlkela 66
l vP++ i++vl+ +
VIMSS678409 64 LGVPPDLIEDVLRRVM 79
789*********9875 PP
== domain 2 score: 45.0 bits; conditional E-value: 4.1e-16
PDH_N 41 eavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllkgksfvgghPmaGteksGvdaareelfenavviLtPtektdkeal 138
+ + +a +v+++vP++ ++ev++ l + l d+++ D++svK+k+ +++ + + + g hPm+G+ ++ ++vv+ ++ d++a
VIMSS678409 138 SILADAGMVIVSVPIHITEEVINRLPK-LPADCILLDLASVKNKPLQAMLAAHE-GPVLGLHPMFGP--------DVGSLAKQVVVYCDGR--DPQAY 223
5577899******************99.*********************99998.89**********........899999*******998..66777 PP
PDH_N 139 elvkelleevgar 151
+ + e l+ gar
VIMSS678409 224 QWLLEQLQVWGAR 236
7777777777776 PP
Or compare VIMSS678409 to CDD or PaperBLAST