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Align VIMSS6823329 to PF14574 (RACo_C_ter)

VIMSS6823329 has 608 amino acids

Query:       RACo_C_ter  [M=261]
Accession:   PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-91  292.5   2.6    2.3e-91  291.5   2.3    1.7  2  VIMSS6823329  


Domain annotation for each sequence (and alignments):
>> VIMSS6823329  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.22      0.22     148     173 ..     254     279 ..     252     281 .. 0.85
   2 !  291.5   2.3   2.3e-91   2.3e-91       3     249 ..     354     606 ..     352     608 .] 0.96

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.22
    RACo_C_ter 148 yagvktLleevglevedidkvylaGa 173
                   +++++ L+++ +l+ edi + ++ G 
  VIMSS6823329 254 NTIISRLCKRNDLKQEDIYQAVVVGN 279
                   68899999999999999999998885 PP

  == domain 2  score: 291.5 bits;  conditional E-value: 2.3e-91
    RACo_C_ter   3 slliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkgkln 99 
                   +l +DiGTN+Ei+l   +++l++s+aaGPA+EG+eik+GmrAa+gAierv+i+++    el vign+kp GicGsG+id+ia++ eag+i+++g++ 
  VIMSS6823329 354 TLAVDIGTNGEIILAGGKRILTCSTAAGPAFEGAEIKYGMRAADGAIERVKITDDV---ELAVIGNAKPIGICGSGLIDAIAQMAEAGVIHESGRIV 447
                   89**************************************************8775...************************************98 PP

    RACo_C_ter 100 kel.........kserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafGsyidlekAitiG 187
                   ++           +erir+ e+  e+vl++ ++++ ++d+v+t+kDi+el+ ak+Ai ag+k+L++e+g+ +e++d+v+laGafG+yi  e A++iG
  VIMSS6823329 448 NTPedlaklparIQERIRKAEGGFEFVLAWGKDTGLKEDVVLTQKDIRELQLAKGAILAGIKILMKEMGIGLEQLDRVLLAGAFGNYISKEAALRIG 544
                   7644455556656899********************************************************************************* PP

    RACo_C_ter 188 llPdlelekvkqvGNtslagAraallsreareeleeiarkityielavekkFmeefvaalfl 249
                   llPd++lek++++GN+++ gA+++lls+e+r+++  +a+  +++el++ ++F+eef++al++
  VIMSS6823329 545 LLPDVPLEKIRAIGNAAGDGAKMILLSKEERKRAALLAELAEHLELSTRSDFQEEFIEALSF 606
                   ***********************************************************987 PP



Or compare VIMSS6823329 to CDD or PaperBLAST