VIMSS6823903 has 616 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-81 257.6 0.3 9.9e-81 256.7 0.3 1.4 1 VIMSS6823903
Domain annotation for each sequence (and alignments):
>> VIMSS6823903
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 256.7 0.3 9.9e-81 9.9e-81 2 249 .. 360 613 .. 359 615 .. 0.95
Alignments for each domain:
== domain 1 score: 256.7 bits; conditional E-value: 9.9e-81
RACo_C_ter 2 islliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkgkl 98
++l++DiGTN+Eivlg++d+++a+saaaGPA+EG++i++Gmr a+gAi+++++d+ +++vign +p GicGs+++d +a ++e g+i+k+gk+
VIMSS6823903 360 VTLILDIGTNGEIVLGSQDRMVACSAAAGPAFEGAQITSGMRGAEGAIDHISFDHGL---SYTVIGNGRPIGICGSALLDGVAGFVELGMINKRGKF 453
79***************************************************9986...************************************9 PP
RACo_C_ter 99 nkel.........kserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafGsyidlekAiti 186
+ ++r+ + eet+++ lv+a ++++++ i+it++Di+el+ ak+Ai agvk+L e++g+e++di++v+laGafG+y+++++A +i
VIMSS6823903 454 LEPEklthpsalkLKDRLIKYEETWAFQLVEAGQTRHGRPILITQNDIRELQLAKGAIAAGVKILQEAMGIECDDIKEVLLAGAFGNYLNPHSACVI 550
7654345554444467889999*************************************************************************** PP
RACo_C_ter 187 GllPdlelekvkqvGNtslagAraallsreareeleeiarkityielavekkFmeefvaalfl 249
Gl+P+ +++k++GN++++gA++alls +++++++++a +++ +el + + F++ f +++++
VIMSS6823903 551 GLIPRELESRIKTIGNAAGNGAKIALLSAQEFSRAKDLAGEVSFVELGSYPGFNTIFAQNTYF 613
*****9***************************************************998766 PP
Or compare VIMSS6823903 to CDD or PaperBLAST