VIMSS6823903 has 616 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.11
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.4e-81 257.3 0.3 1.2e-80 256.3 0.3 1.4 1 VIMSS6823903
Domain annotation for each sequence (and alignments):
>> VIMSS6823903
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 256.3 0.3 1.2e-80 1.2e-80 2 249 .. 360 613 .. 359 615 .. 0.95
Alignments for each domain:
== domain 1 score: 256.3 bits; conditional E-value: 1.2e-80
RACo_C_ter 2 lslliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkgkl 98
++l++DiGTN+Eivlg++d+++a+saaaGPA+EG++i++Gmr a+gAi+++++d+ +++vign +p GicGs+++d +a ++e g+i+k+gk+
VIMSS6823903 360 VTLILDIGTNGEIVLGSQDRMVACSAAAGPAFEGAQITSGMRGAEGAIDHISFDHGL---SYTVIGNGRPIGICGSALLDGVAGFVELGMINKRGKF 453
79***************************************************9987...************************************9 PP
RACo_C_ter 99 nkel.........kserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagietLleevglevedidkvylaGafGsyidiekAiti 186
+ ++r+ + eet+++ lv+a ++++++ i+it++Di+el+ ak+Ai ag+++L e++g+e++di++v+laGafG+y+++++A +i
VIMSS6823903 454 LEPEklthpsalkLKDRLIKYEETWAFQLVEAGQTRHGRPILITQNDIRELQLAKGAIAAGVKILQEAMGIECDDIKEVLLAGAFGNYLNPHSACVI 550
7654345444444467888999*************************************************************************** PP
RACo_C_ter 187 GllPdlelekvkqvGNtslagAraallsreareeleeiarkityielavekeFmdefvaalfl 249
Gl+P+ +++k++GN++++gA++alls +++++++++a +++ +el + + F+ f +++++
VIMSS6823903 551 GLIPRELESRIKTIGNAAGNGAKIALLSAQEFSRAKDLAGEVSFVELGSYPGFNTIFAQNTYF 613
*****9***************************************************998876 PP
Or compare VIMSS6823903 to CDD or PaperBLAST