VIMSS7105016 has 435 amino acids
Query: DUF3237 [M=149]
Accession: PF11578.12
Description: Protein of unknown function (DUF3237)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-42 128.9 3.2 1.7e-20 59.5 0.2 4.3 3 VIMSS7105016
Domain annotation for each sequence (and alignments):
>> VIMSS7105016
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.7 0.2 5e-19 5e-19 5 148 .. 145 273 .. 142 275 .. 0.86
2 ! 59.5 0.2 1.7e-20 1.7e-20 8 84 .. 316 389 .. 312 393 .. 0.93
3 ! 8.2 0.0 0.00011 0.00011 112 148 .. 394 432 .. 389 433 .. 0.88
Alignments for each domain:
== domain 1 score: 54.7 bits; conditional E-value: 5e-19
DUF3237 5 paftlrvkldapievgegpegsrrivpitgGtvkgpklkgevlpgGaDwqtvdpdgtarldaryvlktddGaliyvrytGvltgppevlavlaggek 101
++f+ ++kl++ +g++++g r+++ +++G++++ k++g v++gG D+q++ ++g+++++ +++kt+dG +iy+r+ G+ v ++
VIMSS7105016 145 LVFETTMKLQNSYDLGKTQYGLRKVFVVQNGSITATKIQGSVMSGGLDFQLTLSNGAMEIEQLLMIKTNDGNYIYLRSAGTA--------V-NQ--- 229
699******989********************************************************************94........2.22... PP
DUF3237 102 vdsptdyyfrthprfet.gdekykwLnrkvfvGsgrrrpd.g.veydvyr 148
+ +r+++ fe+ +++ y+wLn++ +vG+ + g + + vy
VIMSS7105016 230 N------DVRMVWDFEApNSSSYNWLNSGKYVGRRIIDSVaGtMKISVYD 273
1......3799******55899***********65444334356666654 PP
== domain 2 score: 59.5 bits; conditional E-value: 1.7e-20
DUF3237 8 tlrvkldapievgegpegsrrivpitgGtvkgpklkgevlpgGaDwqtvdpdgtarldaryvlktddGaliyvrytG 84
t v l+a ++vg++++gsr+i+pitgG+v+g+ l +++l+ GaD+q+ ++ +++dary+ +tddG++i vr+ G
VIMSS7105016 316 TEAVSLGASQSVGASKRGSRNIIPITGGSVTGN-LTAKILAAGADYQNLSN--PITIDARYLWQTDDGEIIIVRNGG 389
667899999***********************6.***************87..999*******************98 PP
== domain 3 score: 8.2 bits; conditional E-value: 0.00011
DUF3237 112 thprfet.gdekykwLnrkvfvGsgrrrpd.gveydvyr 148
++p+fe+ +d+ky Ln+k++++s + gv +++y+
VIMSS7105016 394 LVPTFEVrADSKYSYLNQKLYLSSDPGGGAgGVTITFYE 432
679****77***************998888679999997 PP
Or compare VIMSS7105016 to CDD or PaperBLAST