VIMSS7321943 has 190 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-17 49.1 0.0 4.4e-17 48.8 0.0 1.1 1 VIMSS7321943
Domain annotation for each sequence (and alignments):
>> VIMSS7321943
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 48.8 0.0 4.4e-17 4.4e-17 3 159 .. 8 180 .. 6 182 .. 0.83
Alignments for each domain:
== domain 1 score: 48.8 bits; conditional E-value: 4.4e-17
Cas_Cas4 3 vkinyyliCkrklwlfsheitmeeeselvelGkliheesykrek.........keveise....sikiDvvkkekeklvvvevKkskki...eeaak 83
+ i++yl+C+ +++ + + +e +++ G+ +++e+++ v+i + +D+v +++ + evK + +k
VIMSS7321943 8 SLIRQYLYCPMAAYYTATG-APEPPTLRMQKGRELQQEAAQAAAkalgaqkaeYAVHI-AapplCGTVDAVLWINGRPSPLEVKAAARPrriPIHHK 102
5799******999988877.6888899**********776664423444333345555.1578899******99999999***9876652215688* PP
Cas_Cas4 84 lQllyYlllLe.kkgieak.Gvleypkekkreevelteedreeleeaikeieeiissekppepkkkk.iCkkCayaelC 159
+Q ++Y +++ + g ++ ++++y ++ + ++ +t++ +e l+ a+++ ++i++ kpp + ++ +C++C y++ C
VIMSS7321943 103 AQAAAYTAMVQkRYGKAVTtAYIYYAESGHIAHIHITKDLQELLNYAVSRLQQILQG-KPPVLNPNPaKCQNCWYRKWC 180
*******9999899999999************************************9.78887776659********** PP
Or compare VIMSS7321943 to CDD or PaperBLAST