PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS741619 to PF05114 (MbnB_TglH_ChrH)

VIMSS741619 has 303 amino acids

Query:       MbnB_TglH_ChrH  [M=263]
Accession:   PF05114.20
Description: RiPP precursor modification enzyme MbnB/TglH/ChrH
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.6e-106  341.4   0.0   1.8e-106  341.2   0.0    1.0  1  VIMSS741619  


Domain annotation for each sequence (and alignments):
>> VIMSS741619  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  341.2   0.0  1.8e-106  1.8e-106       2     262 ..      23     288 ..      22     289 .. 0.97

  Alignments for each domain:
  == domain 1  score: 341.2 bits;  conditional E-value: 1.8e-106
  MbnB_TglH_ChrH   2 vGlglrrehleelleekpevdflEvaaenylkaggkakkqleklaeryplvlHGvslslGsaepldeehlkrlkalleelepalvSeHlswssae 96 
                     vG ++++ h+++++++  + +f+Ev+aeny+++gg ++++l++l+e+yp+++HGv+ls+G+++pld++hl+r++++++++ep lvSeHl+wss++
     VIMSS741619  23 VGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETYPVSVHGVCLSIGGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHG 117
                     799******************************************************************************************** PP

  MbnB_TglH_ChrH  97 gvelndLlPlpyteealkvvaerikqvqdilerplllEnvssylafkeselsEleFlaelvertgcglllDvnNvyvnavNhgfdpeayldalpl 191
                     g+ +ndLlPlpyt+++l++v+++++q+q+++ rplllEn+s+y+ f++s++sE+eF+a+++ rtgcglllD+nN +v+a+Nhg+++++yl+++pl
     VIMSS741619 118 GAFYNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSETEFIAAVAGRTGCGLLLDINNAFVSATNHGCSAADYLADFPL 212
                     *********************************************************************************************** PP

  MbnB_TglH_ChrH 192 ervaeiHlAGh.....eekeelliDtHgapvadevwelleealarlgpvptllErDsnippleellaelekirail 262
                     e+v+eiHlAGh     +e+e lliD+H++p+a +vw+l+++++ar+gpvptl+E+Ds++p++ +l a++ ++r+i+
     VIMSS741619 213 EQVGEIHLAGHseqrdDEDEPLLIDSHDRPIAGPVWALYASVIARTGPVPTLVEWDSQLPDWLVLRAQALEARRIM 288
                     ***********6554333444**************************************************99986 PP



Or compare VIMSS741619 to CDD or PaperBLAST