VIMSS746933 has 575 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-208 677.9 5.3 5.8e-208 677.7 5.3 1.0 1 VIMSS746933
Domain annotation for each sequence (and alignments):
>> VIMSS746933
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 677.7 5.3 5.8e-208 5.8e-208 1 541 [. 29 568 .. 29 570 .. 0.98
Alignments for each domain:
== domain 1 score: 677.7 bits; conditional E-value: 5.8e-208
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++ra+++a+G+ dedl+ P+i+v+n +i+P++vhl+d+a+++ ++i+++ g++ ef+ti++sD i+mg+eGmk sL sreiiaDsve v ++++D
VIMSS746933 29 PHRAMFRAMGYDDEDLSSPMIGVANPAADITPCNVHLDDVADAAYDGIDDTEGMPIEFGTITISDAISMGTEGMKASLISREIIADSVELVTFGERMD 126
69************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
++v+i+ CDk++PGm+maa+r+++P+++ +GG++++g+ ++++++ +vfe+vg++a+g++se el+e+er+acP+agsC+G+ftan+ma+++ealG
VIMSS746933 127 GIVTIGGCDKNMPGMMMAAIRTDLPSVFLYGGSIMPGEHD-GREVTIQNVFEGVGAVADGEMSEGELDEMERHACPGAGSCGGMFTANTMASISEALG 223
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
++ gs++ +a ++ + e a+++g+ ve+v++ P+d+lt+e+fenai+l++a+GGstn+vLhlla+a+eag++l+++ f+++s ++P++a+l+P+
VIMSS746933 224 FAPLGSASPPAEHESRYEEARRAGELAVEVVQERRSPSDFLTRESFENAIALQVAVGGSTNAVLHLLALAAEAGIDLDIETFNEISARTPKIADLQPG 321
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...vdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkf 389
g++v++dlh++GGv+ vl+ l+ +gllh daltvtG+t+ae+le+++ + +d d ++++++p+++ g +++L Gnla++Gav+ki+g ++ l++
VIMSS746933 322 GERVMNDLHEVGGVPVVLRALNDAGLLHGDALTVTGNTIAEELEQIDPPTvedLDVDYLNTVEDPIHERGAIRILSGNLAPDGAVIKITGEDH--LHH 417
*********************************************9854433378889********************************999..9** PP
TIGR00110 390 eGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDk 487
eGp +vfe+ee a+e + +g+v+ Gdv+ ir eGP+GgPGmremL tsa++g G ++vaL tDGrfsG+trG+siGhv+Pea +gG+ia +edGD+
VIMSS746933 418 EGPVRVFEQEEGAMEYVQEGHVESGDVICIRNEGPQGGPGMREMLGVTSAVAGQGHAEDVALFTDGRFSGATRGFSIGHVAPEAFVGGPIAALEDGDT 515
************************************************************************************************** PP
TIGR00110 488 ikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavl 541
i+iDi++++l +++ e+e+++r + +++ e+ + +g+Laky + sa +Gav+
VIMSS746933 516 ITIDIDDHELSVDLTEDEMQQRLEGHDP-EPTYDSGVLAKYHNDFGSAANGAVT 568
**********************887765.5699*******************97 PP
Or compare VIMSS746933 to CDD or PaperBLAST