VIMSS748221 has 354 amino acids
Query: DUF92 [M=251]
Accession: PF01940.21
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-61 193.2 17.2 2.5e-61 193.2 17.2 2.4 2 VIMSS748221
Domain annotation for each sequence (and alignments):
>> VIMSS748221
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.5 2.9 0.017 0.017 157 204 .. 35 85 .. 2 89 .. 0.67
2 ! 193.2 17.2 2.5e-61 2.5e-61 2 249 .. 122 339 .. 121 342 .. 0.90
Alignments for each domain:
== domain 1 score: 0.5 bits; conditional E-value: 0.017
DUF92 157 llGtlagllGalliallalllll..lakqlklillvtla.GllGsllDSll 204
l+G +ag++G +l + ++++++ + +l+l+l+++++ ++++ ll S+l
VIMSS748221 35 LVGFVAGVAGQVLGTRIQAAVGEgaAVVDLPLVLFLAASgAFVAALLRSVL 85
567777777776666555555543322266666666666356777777765 PP
== domain 2 score: 193.2 bits; conditional E-value: 2.5e-61
DUF92 2 lalllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKakaklaeekegaRgavqVlanglvalllallyallel 99
+++ll++l+y+ ++++l G+l++vl+ +l+++ +g+ +f++l++Ff lg l Tk++++eK ++++aee+egaRg +Vlan++val++++++a+
VIMSS748221 122 VTVLLGYLSYALDTASLPGMLTGVLLSFLTIVL-GGFGWFAMLITFFGLGGLSTKYRYDEKLDRGIAEENEGARGSGNVLANSIVALFAVVAAAASP- 217
789*****************************9.999**************************************************9999976433. PP
DUF92 100 skellalssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallallllllakqlklillvtlaGllG 197
+++ l++++f++++aaa+ DT++SE G l+ ++prlittl++v+pGt+GgV+++G++ag++Ga +ia + ++l+ ++ ++ + +++l+Gl+G
VIMSS748221 218 -SHIAVDPLLFFYAFAGAVAAAMTDTFSSEFGGLY-DNPRLITTLRPVEPGTDGGVTWQGVAAGAAGAGIIAGI-AALTQDI-STVGSGVILLCGLVG 311
.33332345799********************888.8***********************************99.5677555.8889999******** PP
DUF92 198 sllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNnaVNllstll 249
+++DSllGAt++ s +++N++VN+l+tl+
VIMSS748221 312 MTVDSLLGATVEGS------------------------VVGNQGVNMLATLA 339
**************........................66677777777666 PP
Or compare VIMSS748221 to CDD or PaperBLAST