VIMSS759191 has 187 amino acids
Query: DUF308 [M=73]
Accession: PF03729.18
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.8e-22 63.4 44.3 7.6e-14 38.1 16.5 3.1 3 VIMSS759191
Domain annotation for each sequence (and alignments):
>> VIMSS759191
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 38.1 16.5 7.6e-14 7.6e-14 3 72 .. 26 93 .. 24 94 .. 0.92
2 ! 38.0 19.8 8.2e-14 8.2e-14 1 72 [. 80 149 .. 80 150 .. 0.95
3 ! 11.7 12.9 1.3e-05 1.3e-05 1 47 [. 136 183 .. 136 186 .. 0.90
Alignments for each domain:
== domain 1 score: 38.1 bits; conditional E-value: 7.6e-14
DUF308 3 GilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilsiiaGllll 72
Gi+++ilG + l + + +l++++++G+ll+v+Gi +++ f+ ++ ++g +++ l+++l+i+aG+++l
VIMSS759191 26 GIFFLILGCVGLGMVVGLTLVSMFFFGALLIVGGISHIIDVFKYKE-WKG-MIWQALIAVLYIAAGCIVL 93
9*****************************************6666.443.578999***********98 PP
== domain 2 score: 38.0 bits; conditional E-value: 8.2e-14
DUF308 1 llGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilsiiaGllll 72
l+++l+i++G ++l P++a+++++ +++++l+v G+++++ afa+++++g+g +lll Gi +ii+G+l+l
VIMSS759191 80 LIAVLYIAAGCIVLYDPFLASTLITAFLAAVLIVIGLTRMIMAFALKDSTGWG--WLLLAGITAIILGILIL 149
579********************************************999987..7899***********98 PP
== domain 3 score: 11.7 bits; conditional E-value: 1.3e-05
DUF308 1 llGilliilGilali.wPgaallalviliGvlllvsGivqlvaafaar 47
l Gi +iilGil+l+ wP+ l ++ ++i++ l+v G + ++ a++ +
VIMSS759191 136 LAGITAIILGILILMqWPVSGLWIIGLFIAIELIVTGWTYIFIAISVK 183
57*********99876999999999****************9999776 PP
Or compare VIMSS759191 to CDD or PaperBLAST