VIMSS7646784 has 493 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-13 37.1 0.0 3e-13 36.0 0.0 1.6 1 VIMSS7646784
Domain annotation for each sequence (and alignments):
>> VIMSS7646784
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 36.0 0.0 3e-13 3e-13 18 171 .. 176 328 .. 172 349 .. 0.72
Alignments for each domain:
== domain 1 score: 36.0 bits; conditional E-value: 3e-13
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqada.. 112
+ +v + + k ge+++DP CG+G++l a ++n + + + ++ ++++ g+++++ a +N g++ ++++ +
VIMSS7646784 176 RFMVDRVDPKLGESIMDPACGTGGFLACAFDHVKNKY-----------VKSVADHQTLQQQIHGVEKKQLPHLLATTNMLLHGIEVPVQIRHDNTln 261
67999*********************76666666666...........2344445556777*******99888999999999988888888766511 PP
UPF0020 113 akLrlkegevdvivtnpPYGerlgs........kkalekLYseflrelkrvlrgggrlvlltaenka 171
+ L +++ dvivtnpP+G ++ + + ++ + fl+ + +vl+++gr+++++++
VIMSS7646784 262 KPLSSWDEQLDVIVTNPPFGGTEEDgieknfpaEMKTRETADLFLQLIVEVLAKNGRAAVVLPDGTL 328
556677779***********65433111111113334555667778888888888888887776655 PP
Or compare VIMSS7646784 to CDD or PaperBLAST