PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS7775564 to PF04341 (DUF485)

VIMSS7775564 has 103 amino acids

Query:       DUF485  [M=89]
Accession:   PF04341.16
Description: Protein of unknown function, DUF485
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-40  121.9   0.0      5e-40  121.8   0.0    1.0  1  VIMSS7775564  


Domain annotation for each sequence (and alignments):
>> VIMSS7775564  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.8   0.0     5e-40     5e-40       1      88 [.      10      98 ..      10      99 .. 0.98

  Alignments for each domain:
  == domain 1  score: 121.8 bits;  conditional E-value: 5e-40
        DUF485  1 qaspkFqeLvrkrrrfafpltaiflvvYflfvllvafapdllatkvveg.nitvgillgllqfvltfvltglYvrrAnrefDplaeeir 88
                  q+sp+F+eLvrkr+rfa++l+ai+l++Y +f+ll+a+ p++l++k+++g +it+gi+lg++++v++fvltg+YvrrAn+efD+l+++i+
  VIMSS7775564 10 QNSPRFKELVRKRERFAWILSAIMLGLYSGFILLIAYGPQVLGAKISPGsSITWGIPLGVGLIVSAFVLTGIYVRRANGEFDDLNNAIL 98
                  689***********************************************************************************997 PP



Or compare VIMSS7775564 to CDD or PaperBLAST