PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS81644 to PF18367 (Rv2175c_C)

VIMSS81644 has 134 amino acids

Query:       Rv2175c_C  [M=56]
Accession:   PF18367.5
Description: Rv2175c C-terminal domain of unknown function
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-31   93.4   0.1    5.4e-31   92.8   0.1    1.3  1  VIMSS81644  


Domain annotation for each sequence (and alignments):
>> VIMSS81644  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   0.1   5.4e-31   5.4e-31       1      56 []      66     133 ..      66     133 .. 0.99

  Alignments for each domain:
  == domain 1  score: 92.8 bits;  conditional E-value: 5.4e-31
   Rv2175c_C   1 VkgLpGtltvLrDgGfddeeilrWLFteDesLp............grPidALregrkrEVkRrAqalA 56 
                 Vk+LpG+lt+L+Dg f+++ei+rWLFt+D+sL+            +rP+dAL+++++rEV RrAqa+A
  VIMSS81644  66 VKSLPGLLTILHDGSFHETEIVRWLFTPDPSLTltrdgsrdvvsnARPVDALHTHQAREVVRRAQAMA 133
                 9*******************************************99*********************9 PP



Or compare VIMSS81644 to CDD or PaperBLAST