PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS81693 to PF11248 (DUF3046)

VIMSS81693 has 67 amino acids

Query:       DUF3046  [M=62]
Accession:   PF11248.12
Description: Protein of unknown function (DUF3046)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-32   96.7   0.3    4.5e-32   96.6   0.3    1.0  1  VIMSS81693  


Domain annotation for each sequence (and alignments):
>> VIMSS81693  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.3   4.5e-32   4.5e-32       1      61 [.       4      64 ..       4      65 .. 0.98

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 4.5e-32
     DUF3046  1 MRlteFwelveeeFGsayaeslardhvlselggrTaeeAleaGvdprdVWralcdafdvPe 61
                +RlteF+e+v   FG+ay++s++ dhvl++++grT+++A+e+Gv++rdVWralc +fdvP+
  VIMSS81693  4 VRLTEFHERVVLRFGAAYGASVLVDHVLTGFDGRTVAQAIEDGVELRDVWRALCVDFDVPR 64
                59**********************************************************8 PP



Or compare VIMSS81693 to CDD or PaperBLAST