VIMSS81902 has 1206 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9e-33 99.9 0.0 1.6e-32 99.1 0.0 1.4 1 VIMSS81902
Domain annotation for each sequence (and alignments):
>> VIMSS81902
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 99.1 0.0 1.6e-32 1.6e-32 58 257 .. 1003 1206 .] 989 1206 .] 0.84
Alignments for each domain:
== domain 1 score: 99.1 bits; conditional E-value: 1.6e-32
Met_synt_B12 58 kakavvglfpAnsegddievyades.rseelatlhtLrqqaekeegkpnlclaDfvapk....esgvkDyiGlFavtaglgieelakefeaekdd 147
a v+g fpA se++di+v a+ + ++e+ ++++ rqq+ lc+aDf++++ e+ + D++ + vt+g+ i +++ e+ + ++
VIMSS81902 1003 YAAVVYGYFPAVSEDNDIVVLAEPRpDAEQRYRFTFPRQQRG-----RFLCIADFIRSRdlatERSEVDVLPFQLVTMGQPIADFVGELFVS-NS 1091
456789*************99776646678889*******54.....59*******997444355668******************998777.56 PP
Met_synt_B12 148 Ysa.ilvkaladrLaeAfaellhekvrkelWgyakdeklsn......eelikekYqgiRpApGYpacpdhtekktlfelldaeekigieLtesla 235
Y++ + v+ + +L+eA+ae+ h+++r+el +++ + ++s e+ +k Y+g R A+GY acpd + + +++ell+ e+ ig++++e+l
VIMSS81902 1092 YRDyLEVHGIGVQLTEALAEYWHRRIREEL-KFSGNRTMSAddpeavEDYFKLGYRGARFAFGYGACPDLEDRIKMMELLQPER-IGVTISEELQ 1184
665155899******************995.5655555544333333899*********************************9.********** PP
Met_synt_B12 236 mtPaasvsGlyfahpearyFav 257
++P++s ++++ hp+a+yF+v
VIMSS81902 1185 LHPEQSTDAFVLHHPAAKYFNV 1206
********************97 PP
Or compare VIMSS81902 to CDD or PaperBLAST