PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS820090 to PF05114 (MbnB_TglH_ChrH)

VIMSS820090 has 280 amino acids

Query:       MbnB_TglH_ChrH  [M=263]
Accession:   PF05114.20
Description: RiPP precursor modification enzyme MbnB/TglH/ChrH
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   4.2e-101  323.7   0.0   4.8e-101  323.5   0.0    1.0  1  VIMSS820090  


Domain annotation for each sequence (and alignments):
>> VIMSS820090  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.5   0.0  4.8e-101  4.8e-101       2     262 ..       5     269 ..       4     270 .. 0.96

  Alignments for each domain:
  == domain 1  score: 323.5 bits;  conditional E-value: 4.8e-101
  MbnB_TglH_ChrH   2 vGlglrrehleell..eekpevdflEvaaenylkaggkakkqleklaeryplvlHGvslslGsaepldeehlkrlkalleelepalvSeHlswss 94 
                     +Glg+rr+++e++l  +e++++ f+E a+en+lk+gg+a+kq++++aer+pl+lHG+s+slG+++pld++ ++ +k+++ +++++++S+Hls+++
     VIMSS820090   5 AGLGYRRDLAEDFLslSENSPICFIEAAPENWLKMGGRARKQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMCRYDCTFFSDHLSYCH 99 
                     8************93335555************************************************************************** PP

  MbnB_TglH_ChrH  95 aegvelndLlPlpyteealkvvaerikqvqdilerplllEnvssylafkeselsEleFlaelvertgcglllDvnNvyvnavNhg.fdpeaylda 188
                     ++g +l+dLlPlp+tee+++++a+ri++vqd+l+ ++++En s+yl+ + +e++E+eFl++++++++cg++lDvnN+yvnavNhg  +pea+l++
     VIMSS820090 100 DGG-HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAVAREADCGIHLDVNNIYVNAVNHGlLSPEAFLEN 193
                     **9.*********************************************************************************669******* PP

  MbnB_TglH_ChrH 189 lplervaeiHlAGh.eekeelliDtHgapvadevwelleealarlgpv.ptllErDsnippleellaelekirail 262
                     +++ rv +iH+AGh  e+ elliDtHga+v ++vw+lle a+++l ++ ptllErD+n+pp++el ae++ki++++
     VIMSS820090 194 VDAGRVCYIHIAGHdAETPELLIDTHGAAVLPTVWDLLELAYTKLPTIpPTLLERDFNFPPFAELEAEVAKIADYQ 269
                     **************444567*************************99889**********************9886 PP



Or compare VIMSS820090 to CDD or PaperBLAST