VIMSS834777 has 476 amino acids
Query: DUF3373 [M=409]
Accession: PF11853.12
Description: Protein of unknown function (DUF3373)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-39 121.8 5.1 1.2e-38 119.2 5.1 1.9 1 VIMSS834777
Domain annotation for each sequence (and alignments):
>> VIMSS834777
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 119.2 5.1 1.2e-38 1.2e-38 5 368 .. 106 448 .. 102 475 .. 0.75
Alignments for each domain:
== domain 1 score: 119.2 bits; conditional E-value: 1.2e-38
DUF3373 5 dtlytnrlrLnlkakatenvsfkgrLamyKafGeqddeavsnsnsksavlDgtlgevpsddslrvdrayftykniadvpiwfSvGRRPstdGapsnlr 102
++ + n l Ln++a ++++++f grL+m K++++ + + + lD +++ s l vdray++y + ++ + vGR P tdG++snlr
VIMSS834777 106 NNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGW------SGTPYDLDAGRNTRSSGPVLYVDRAYLDYY--ITPEWIATVGRQPGTDGPGSNLR 195
566889**************************97654......2345689**********************7..5678******************* PP
DUF3373 103 enkeerggsPlsllidveFDGatlgyalekvtelpgayvklCyGrGfenaagraegleak.kenslkdvdllGliivpidddqykvel..qlarafni 197
+n+ +++ P +l i+ D a + y++e++++ + ++ yG+ + ++ ++++ ++++ d +l+ + ++++ +e + fn+
VIMSS834777 196 NNALRQSTYP-ALAINALGDAAVITYKPESLQDHK-VAIRAAYGKTYQW--DEEGKVRDWmSDQKDADANLYYA----AVEGELPIEGmgDNLIIFNV 285
**88888899.9*****************877765.6799*****8876..33333222224444456666543....34555555431122223333 PP
DUF3373 198 fdypkgaaavsktlag.......nfkafgsvae.ssevGdidlagllflaevkgegiglddlnaFvslalsktepngnleaaltegllkdealgstes 287
+ ++a ++ g + ++ ++ ++G++ la + f + + ++g ++n+Fvsl+ s+ ++l + +++l + ++
VIMSS834777 286 AHMTDFALPLP----GinlpigpSGALVNVLQDgVYNLGNLTLANIHFENYN---AFG-TNFNYFVSLGYSNGTNAHTL----SAIPAVQSQL-EFNE 370
33333322222....123345543334444444689************9885...445.67**********98777764....4444444454.5689 PP
DUF3373 288 ktGysvyvGvrydleatkgklGlEYNhGSkyWisft.aaeDdligsKlatRGdvyevYliqelklkealslklgyqyydyeY 368
k+Gy+v+vG ryd+ ++ k+G E+ +GS+yW +++ ++ d + ++ tRG++ + Y+i++l+ + +l+l+y+ ++ +
VIMSS834777 371 KDGYAVHVGGRYDF-TKTLKVGYEFFWGSRYWYTMSrPSINDPLNIRM-TRGTAHDFYVIYQLD--RYQFLRLSYTNIQNIW 448
*************6.899*****************8357788888776.9**************..6889999999887555 PP
Or compare VIMSS834777 to CDD or PaperBLAST