VIMSS8500650 has 685 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.11
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-46 144.4 0.0 2.4e-46 143.9 0.0 1.2 1 VIMSS8500650
Domain annotation for each sequence (and alignments):
>> VIMSS8500650
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 143.9 0.0 2.4e-46 2.4e-46 4 248 .. 436 683 .. 434 685 .] 0.91
Alignments for each domain:
== domain 1 score: 143.9 bits; conditional E-value: 2.4e-46
RACo_C_ter 4 lliDiGTNaEivlgnk.dwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek...pkGicGsGiidliaelleagiidkkg 96
ll D+GTN+E vl + d l++s a GPAlEG +++cG A+pgAi +++ p+ l +++ ++ + p+ +cG+G ++l+ ll+ag++d++g
VIMSS8500650 436 LLADLGTNGEFVLATGpDSALVTSVALGPALEGIGLSCGGVAQPGAIAAFTLGPAGLAPTVLPEDDGApaaPTHLCGTGYLSLLRVLLRAGLLDEDG 532
899**********8754999************************************99999998764445599************************ PP
RACo_C_ter 97 klnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagietLleevglevedidkvylaGafGsyidiekAitiGllPdle 193
++ e +s+ r+ + + +++ + ++ D++e+++ kaA ++e Ll e+g++ + +d vylaGa G++ +++ t+G lP
VIMSS8500650 533 RFVMEPHSPLARRLAAS-LVEVRGERRLPLPGGLHLSAGDVEEVLKVKAAFSLAYERLLAEAGMSGTALDAVYLAGALGEHARPDDLETLGFLPAGV 628
**999877777664432.33333444455678***************************************************************** PP
RACo_C_ter 194 lekvkqvGNtslagAraallsreareeleeiarkityielavekeFmdefvaalf 248
+ ++++vGN+sl+gA+++ll++e r+++++ ++ + ++l + ++F+ f++ +
VIMSS8500650 629 AGRTRAVGNASLRGAELLLLQPELRARINAWRTGCRVVDLTTASDFSAAFLRHMR 683
**************************************************99886 PP
Or compare VIMSS8500650 to CDD or PaperBLAST