PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS859865 to PF09313 (DUF1971)

VIMSS859865 has 286 amino acids

Query:       DUF1971  [M=80]
Accession:   PF09313.15
Description: Domain of unknown function (DUF1971)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-37  113.4   0.4    3.7e-37  112.5   0.4    1.5  1  VIMSS859865  


Domain annotation for each sequence (and alignments):
>> VIMSS859865  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.4   3.7e-37   3.7e-37       1      80 []       9      89 ..       9      89 .. 0.99

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 3.7e-37
      DUF1971  1 krtpvfteetlPaallekHnTkaGtwgkltVleGelkfrildedgeeeeelvlspe.qpaivePqvwHkveplsddvefqv 80
                 k++pv+t+++lP++++ekHnTk GtwgkltVl+G+lkf+ l+e+g++++e++++pe ++++vePq+wH+ve+lsdd+e+ +
  VIMSS859865  9 KQMPVWTKDKLPQMFQEKHNTKVGTWGKLTVLKGKLKFYELTENGDVIAEHIFTPEsHIPFVEPQAWHRVEALSDDLECTL 89
                 89*****************************************************************************86 PP



Or compare VIMSS859865 to CDD or PaperBLAST