VIMSS859897 has 480 amino acids
Query: DUF945 [M=459]
Accession: PF06097.15
Description: Bacterial protein of unknown function (DUF945)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-71 227.8 10.7 1.8e-71 227.6 10.7 1.0 1 VIMSS859897
Domain annotation for each sequence (and alignments):
>> VIMSS859897
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 227.6 10.7 1.8e-71 1.8e-71 1 458 [. 1 463 [. 1 464 [. 0.90
Alignments for each domain:
== domain 1 score: 227.6 bits; conditional E-value: 1.8e-71
DUF945 1 MKKslvavgvvvalgaawtGaswytGkqaeqrldalvaqlneqlakalpeegl.......sYerGfFsStatyvlqaqgpdndeegqpvslvldstid 91
MKKs +a+gvv+ l+a+w +++w+tGk+ae+++ +++qln+ k+ e+ ++erG+F S+ + +++ ++ +++ + l st++
VIMSS859897 1 MKKSKIAAGVVISLAAVWCAGAWFTGKKAEEEYLHQLKQLNQLFTKTEALEESkifykniKFERGLFASHIQDQIE-----IHKANETIIIPLSSTLY 93
******************************************9888877776677*********************.....899************** PP
DUF945 92 HGPlplsr..kfnlipalAsvhtelendeatkklfekakgksPltidtrvgysGstsselslpafdy..eedg..eklnfsGldlkvdlskdlkkvkl 183
HGPlpl r k+n+ pa +s++t l ++++t++ f+ +++++Pl+++ +ys s++ el+l++ +y e + +++++s l++dl+++ +
VIMSS859897 94 HGPLPLDRvaKLNFVPAIFSSQTLLGKNATTQAFFDITESEKPLQLNFAMNYSLSGNAELKLASGQYhnE--QskTDFDWSNVVLNIDLNQN-TPNNY 188
*******************************************************************544..545**************944.44456 PP
DUF945 184 egdlpglqveaan.....keslelkgltldsdlkrgkeg.lylGdsslkidslsvssegkegv....elkglsld.sdstedgdflnsqlkysldslk 270
++++ ++ +a+n s+++k+l ++++l+ +k+ +y G+ + ki+ ++ + e e+ +++ s +++++gd++n+ k++ld+l+
VIMSS859897 189 VLSVDTFNSNAPNhavstASSIKIKDLVVQGSLQSTKWPfIYSGNINSKIGYFEQNTESPETGekfsLIQKNSQAnLTTQVEGDTVNIINKTNLDELH 286
6778888888888889999******************997777******998888877777556666454444445999******************* PP
DUF945 271 vngkdlgslqlklslnnLDaaalqalseayqqlqakalaakdpeelqealeealkaalpkLLkknPeleidplslknpkGestlnlsldl..edsakd 366
+ng++lg++ ++++n++D++alq+l + + ++ + +++ l++ l ++l++a + +++P+++ +pls +kG++ l+l+++l +++
VIMSS859897 287 INGNNLGKVTNNVEFNHIDGNALQELLNILVAIGKA----DSDMPLSKTLVQKLQQAGMIIANNQPQIKFTPLSISDEKGKVALDLNIALvpNPKFDL 380
******************************999854....67899*********************************************54333333 PP
DUF945 367 daenlaqllkkleldaklslpkamleelltqaaasqegadaedaekqakqqveellqmlqmqglltlegdaiksslqyadGqvtlNGkkmpl 458
+ + l + +k +++++++k+++ ll+ +++d ++el+ +++ + ++++++++++++l+++++ ++lNGk++p+
VIMSS859897 381 MRSGLYKQFKD--FSINFDVNKETAISLLSKFVPENQKQD-------FVHRLNELVTEGEVNDIIVNTDKTVTLTLALENNDLKLNGKPIPE 463
44555556666..*******************88888887.......88899**************************************96 PP
Or compare VIMSS859897 to CDD or PaperBLAST