PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS859950 to PF09829 (DUF2057)

VIMSS859950 has 221 amino acids

Query:       DUF2057  [M=192]
Accession:   PF09829.13
Description: Uncharacterized protein conserved in bacteria (DUF2057)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.6e-58  182.6   5.1    5.2e-58  182.5   5.1    1.0  1  VIMSS859950  


Domain annotation for each sequence (and alignments):
>> VIMSS859950  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.5   5.1   5.2e-58   5.2e-58       2     192 .]      24     216 ..      23     216 .. 0.94

  Alignments for each domain:
  == domain 1  score: 182.5 bits;  conditional E-value: 5.2e-58
      DUF2057   2 LtlpseiellavdgqkvksslfsgaksltL.edGehqivvryeelvredsdsdshelvkSepvivtfdaaadqeltlklpklrnareakafakspqlk 98 
                  ++++s++e+la+dgqk+++sl + ak++t+ ++++hq+vvr +e+v+++   ++++l++S+pvivtf+++a ++l +++p +rn +  ++f++ p+++
  VIMSS859950  24 VSTSSNLEFLAIDGQKASKSLGK-AKTFTVdDTQSHQVVVRLNEIVGSG---SNQSLFESNPVIVTFQGNA-EDLVISAPAIRNLDSGDKFNQMPNIT 116
                  6789**************88886.59****789*************444...5567************877.7************************* PP

      DUF2057  99 ltdksgksvavkqdklkkeglqigrnyekelaeynqagaaa......tavaaaaaaaaaaaaaaaqkaktsaqgentaeqmLqywylqAdketRkeFl 190
                  +++ksg+++++k d+lk+egl +  n+ + laeyn++gaaa      ++++a + +a +a +a+a+k+k ++qgen+aeq+Lqyw++qAdket+ +Fl
  VIMSS859950 117 VKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAAAsvskftATTSANSMVAVPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFL 214
                  **********************************************9777777779999999************************************ PP

      DUF2057 191 aW 192
                  +W
  VIMSS859950 215 NW 216
                  ** PP



Or compare VIMSS859950 to CDD or PaperBLAST