VIMSS876513 has 613 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.9e-256 837.1 1.0 3.4e-256 836.9 1.0 1.0 1 VIMSS876513
Domain annotation for each sequence (and alignments):
>> VIMSS876513
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 836.9 1.0 3.4e-256 3.4e-256 2 542 .. 18 606 .. 17 607 .. 0.98
Alignments for each domain:
== domain 1 score: 836.9 bits; conditional E-value: 3.4e-256
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
aral++atG+kd+d++kPiia++ns+t++vPghvhlkdl++lv++eie+aGgvakefntiav+DGiamgh+Gm+ysLpsreiiaDsve++v+ah++Da
VIMSS876513 18 ARALWRATGMKDDDFKKPIIAIANSFTQFVPGHVHLKDLGQLVAREIERAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADA 115
79************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
+v+is+CDki+PGmlmaalrlniP+i+vsGGpmeagktkl + +d+++a++ +a++ s+e++ e+ersacPt+gsCsG+ftansm+cltealGl
VIMSS876513 116 IVCISNCDKITPGMLMAALRLNIPVIFVSGGPMEAGKTKL--ASHGLDLVDAMVIAADSSASDEKVAEYERSACPTCGSCSGMFTANSMNCLTEALGL 211
***************************************8..557899************************************************** PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
+lPg++++lat+++++el+ ++g++ivel+++++ Pr+i++ +afena+tld+a+GGstnt+Lhlla+a+ea+++++l d+drlsr+vP+l
VIMSS876513 212 ALPGNGSTLATHSDREELFLRAGRTIVELCQRYYGdndesvlPRNIANFKAFENAMTLDIAMGGSTNTILHLLAAAQEAEIDFDLRDIDRLSRHVPQL 309
**********************************99999*********************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdqdvi 350
+k++P+ +k+ +ed+hraGG+ ++l+el + gllh+d tv kt+ae +++ ++++ ++ +i
VIMSS876513 310 CKVAPNIQKYhMEDVHRAGGIFSILGELARGGLLHTDLPTVHSKTMAEGIAQWDITQtsdeavhhffkagpagiptqtafsqstrwdsldddRENGCI 407
*******9999********************************************999******************************77555555** PP
TIGR00110 351 rsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkk 448
rs++++++kegglavL+Gn+a +G+vvk+agv+e+i +feG+ak+fes++ a+ +il+ +vkeGd+v+iryeGPkGgPGm+emL+Pts+l++ GLgk+
VIMSS876513 408 RSVEHAYSKEGGLAVLYGNIALDGCVVKTAGVDESIHVFEGNAKIFESQDSAVRGILADEVKEGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLGKA 505
************************************************************************************************** PP
TIGR00110 449 vaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyaklvssadkGa 539
+aL+tDGrfsGgt+GlsiGh sPeaa+gG+i+lv+dGDk+ iDi+nr ++l vs+eela+rr +++kk++ r+v aL++ya l++sadkGa
VIMSS876513 506 CALLTDGRFSGGTSGLSIGHASPEAAAGGTIGLVQDGDKVLIDIPNRSINLLVSDEELAARRVEQDKKGWkpvearpRKVTTALKAYALLATSADKGA 603
**********************************************************************99***9999******************* PP
TIGR00110 540 vld 542
v++
VIMSS876513 604 VRN 606
*87 PP
Or compare VIMSS876513 to CDD or PaperBLAST