VIMSS879487 has 1239 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-124 399.2 0.0 7.8e-124 398.5 0.0 1.3 1 VIMSS879487
Domain annotation for each sequence (and alignments):
>> VIMSS879487
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 398.5 0.0 7.8e-124 7.8e-124 1 273 [] 941 1221 .. 941 1221 .. 0.95
Alignments for each domain:
== domain 1 score: 398.5 bits; conditional E-value: 7.8e-124
Met_synt_B12 1 dleelveyidWtpffqawelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvg.ddievyadesrseelatlhtLr 94
dl+ l+eyidWtpff +w+l+gkyp+il+de+vge+a++l++dA++mL+k+i+ekl++a+av+g++pan+v+ dd+evy d+ + +a+lh+Lr
VIMSS879487 941 DLNVLAEYIDWTPFFISWDLAGKYPRILTDEVVGEAATALYADATQMLRKLIDEKLISARAVFGFWPANQVNdDDLEVYGDDG--KPQAKLHHLR 1033
58899*****************************************************************96488****8888..5669****** PP
Met_synt_B12 95 qqaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdeklsnee 189
qq+ k++g+pn++laDfvapk+sg +DyiG+f++tag+g+ee+ak+++++ DdY++i+vkalaDrLaeA+ae+lh++vrke+Wgyakde+l+ne+
VIMSS879487 1034 QQTIKPDGKPNFSLADFVAPKDSGLTDYIGGFITTAGIGAEEVAKAYQDKGDDYNSIMVKALADRLAEACAEWLHQQVRKEYWGYAKDEALDNEA 1128
*********************************************************************************************** PP
Met_synt_B12 190 likekYqGiRpApGYpacpdhsekktlfelld.........aeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrkg 273
like+Y GiRpApGYpacpdh+ek tlf lld + k g+ Lte++am Paa+vsG+yfahp+++yFavgk++kdqve+y++rkg
VIMSS879487 1129 LIKEQYMGIRPAPGYPACPDHTEKGTLFALLDplpegtpehTPGKSGVFLTEHYAMFPAAAVSGWYFAHPQAQYFAVGKVDKDQVESYTARKG 1221
*******************************843333222234468*********************************************97 PP
Or compare VIMSS879487 to CDD or PaperBLAST