VIMSS879521 has 233 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.13
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-83 266.3 0.6 1.3e-83 266.1 0.6 1.0 1 VIMSS879521
Domain annotation for each sequence (and alignments):
>> VIMSS879521
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 266.1 0.6 1.3e-83 1.3e-83 3 218 .. 10 226 .. 8 227 .. 0.97
Alignments for each domain:
== domain 1 score: 266.1 bits; conditional E-value: 1.3e-83
DUF3053 3 vllvv..llLagCgdkekeqRkAFiefLqntvirs.gvklptlteeqkkafGdyasdYavltafsqqlsqavdtslepvldavs..rirvpqdyvtqr 95
+l+v+ llL+gCgdke+eqR+AF +fLq+++i++ gv++p+lt+++kkafGdy s+Yav+++f +++dt+++p+++ ++ ++r+++d++++r
VIMSS879521 10 LLAVAlpLLLTGCGDKEPEQRTAFTQFLQTRIIDKpGVHAPKLTDDEKKAFGDYSSHYAVISDF----GAGMDTAVQPLAGLMQkgSFRSVSDVIQRR 103
555555699*******************************************************....9***************999*********** PP
DUF3053 96 delrqaagalnllaqqlqnakaqadaaraaLkqpddlkvvydkaydktVtapanaltrvipaaeslveqlvqvgdflqkqgdqvefegngiqvktpqq 193
++l+ ++ +l+++ ++l+ ++ +adaa+a+Lkqpddlkvvydkayd+tV++pan++++v+p+ + ++ + ++v+d+++++++q++++g++i+vk+p++
VIMSS879521 104 ADLAAVQTGLDEVGEKLTIEQGKADAAHAKLKQPDDLKVVYDKAYDRTVSVPANTFREVLPQIKGTFSSGLKVADYVDAHKSQIDISGSAITVKDPVV 201
************************************************************************************************** PP
DUF3053 194 asqyNkllteLaeqqqellqaqksl 218
++++Nkll+eL+eq ++++qaq++l
VIMSS879521 202 QTELNKLLQELNEQGKNAQQAQARL 226
**********************987 PP
Or compare VIMSS879521 to CDD or PaperBLAST