VIMSS882774 has 615 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.2e-256 835.6 1.3 9.7e-256 835.4 1.3 1.0 1 VIMSS882774
Domain annotation for each sequence (and alignments):
>> VIMSS882774
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 835.4 1.3 9.7e-256 9.7e-256 2 542 .. 18 606 .. 17 607 .. 0.98
Alignments for each domain:
== domain 1 score: 835.4 bits; conditional E-value: 9.7e-256
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
aral++atG+kded++kPiia++ns+t++vPghvhlkd+++lv++e+e+aGgvakefntiav+DGiamgh+Gm+ysLpsreiiaDsve++v+ah++Da
VIMSS882774 18 ARALWRATGMKDEDFKKPIIAIANSFTQFVPGHVHLKDMGQLVAREVERAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADA 115
79************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
+v+is+CDki+PGmlma+lrlniP+i+vsGGpmeagktkl + +d+++a++ +a++ s+e++ e+ersacPt+gsCsG+ftansm+cltealGl
VIMSS882774 116 IVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKL--ASHGLDLVDAMVIAADSTASDEKVAEYERSACPTCGSCSGMFTANSMNCLTEALGL 211
***************************************8..557899************************************************** PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
+lPg++++lat++++++l+ ++g++iv+l+++++k Pr+i++ +afena+tld+a+GGstnt+Lhlla+a+ea+++++l ++d+lsrkvP+l
VIMSS882774 212 ALPGNGSALATHSDREQLFLQAGRTIVDLCRQYYKenddsvlPRNIANFKAFENAMTLDIAMGGSTNTILHLLAAAQEAEIDFDLRHIDHLSRKVPQL 309
************************************************************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdqdvi 350
+k++P+ +k+ +ed+hraGG+ ++l+el + gllh+d tv ktlae ++k ++++ ++ +i
VIMSS882774 310 CKVAPNIQKYhMEDVHRAGGIFSILGELARGGLLHTDLPTVHSKTLAEGIAKWDITQtddeavhtffkagpagiptqtafsqstrwesldddRENGCI 407
*******9999********************************************999******************************77555555** PP
TIGR00110 351 rsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkk 448
rs+++++++egglavL+Gn+a +G+vvk+agv+e+i +feG+ak+fes++ a+ +il+ +vk+Gd+v+iryeGPkGgPGm+emL+Pts+l++ GLgk+
VIMSS882774 408 RSVQHAYSQEGGLAVLYGNIALDGCVVKTAGVDESIHVFEGSAKIFESQDSAVRGILADEVKAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLGKD 505
************************************************************************************************** PP
TIGR00110 449 vaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyaklvssadkGa 539
+aL+tDGrfsGgt+GlsiGh sPeaa+gGai+lv+dGDk+ iDi+nr ++l ++++e+aerr +++kk++ r+v aL++ya l++sadkGa
VIMSS882774 506 CALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVRDGDKVLIDIPNRSINLLIDDAEMAERRTEQDKKGWkpvesrpRKVTTALKAYALLATSADKGA 603
**********************************************************************9****9999******************* PP
TIGR00110 540 vld 542
v+d
VIMSS882774 604 VRD 606
*98 PP
Or compare VIMSS882774 to CDD or PaperBLAST