VIMSS885740 has 173 amino acids
Query: DUF3237 [M=149]
Accession: PF11578.13
Description: Protein of unknown function (DUF3237)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-27 82.5 0.0 1.5e-27 82.3 0.0 1.0 1 VIMSS885740
Domain annotation for each sequence (and alignments):
>> VIMSS885740
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 82.3 0.0 1.5e-27 1.5e-27 1 148 [. 22 170 .. 22 171 .. 0.95
Alignments for each domain:
== domain 1 score: 82.3 bits; conditional E-value: 1.5e-27
--EEEEEEEEEEE---EEEEEETTEEEEEEEEEEEEEESTT--EEE-ST-EEEEEE-TTS-EEEEEEEEEEETTS-EEEEEEEEEEE--GGGHHHHHH CS
DUF3237 1 pklepaftlrvkldapievgegpegsrrivpitgGtvkgpklkgevlpgGaDwqtvdpdgtarldaryvlktddGaliyvrytGvltlppevlavlag 98
p+le ++t+ +k dap+ +g ++g r+ +++gG++ g++++g vl+gG+ ++ + + a l++r++l t+ G++i+v+++G l +++ + +l++
VIMSS885740 22 PHLEKVLTVILKTDAPVLMGICSDGLRSNSNVVGGEFYGENFSGSVLSGGSNTLVELSSELAFLETRFTLVTQLGEMINVESRGALLVDETGQHELQN 119
89*******************999*******************************999**************************************** PP
T-..---GGG-EEEEEEEEEESSGGGGGGGSS-EEEEEEEESS.EEEEEEEE CS
DUF3237 99 ge.kvdsptdyyfrthprfetgdekykwLnrkvfvGsgrrrve.gveydvyr 148
g + + + +y+++++prf+++ ++ +wL+++ f+G+ + + + ++ +yr
VIMSS885740 120 GLwPIS-EGHYQCTCTPRFQVALGPNEWLEKSAFIGRFEYLYGnEALISFYR 170
**9966.89***************************9555555489999998 PP
Or compare VIMSS885740 to CDD or PaperBLAST