VIMSS899405 has 253 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.12
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.8e-78 247.6 2.1 6.7e-78 247.4 2.1 1.0 1 VIMSS899405
Domain annotation for each sequence (and alignments):
>> VIMSS899405
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 247.4 2.1 6.7e-78 6.7e-78 1 218 [. 18 246 .. 18 247 .. 0.99
Alignments for each domain:
== domain 1 score: 247.4 bits; conditional E-value: 6.7e-78
DUF3053 1 lllllvvllLagCgdkepeqRkAFiafLqntvies.gvkvpalteaqkkafGdyvsdYav.ltafsqqlsqavdtsleplldavsrirvvqdyvtrrd 96
++++lv+++L+gC++k++++R+AF+++L+++vi+s +v v++lt+aq++afG+y++dY+v l+a++q+++++++t++e++++ v i++++d++++ +
VIMSS899405 18 VIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQVITSpVVGVCELTPAQRQAFGHYADDYDVlLAAYGQIFAVVYETGQEDKITGV--IQSERDNLVFLN 113
6899********************************************************999*********************..************ PP
DUF3053 97 aLrqaagalnelaqqlqnakaqadaaraaLkqpddlkavydkaydktVtapanalepvipaaesaledlvqvgdflqkqgdqvefegngiqv...... 188
+Lr a++++n+++ +l+n++++++++++aLk+p+d+k+v+d+a++ktVt+ +++++++++++ ++l++lv++g+flqkqg++v+fe+ng++v
VIMSS899405 114 ELRVARDVNNRFILRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVfadlaa 211
************************************************************************************************** PP
DUF3053 189 ktpqqasqyNkllta.....Lneqqqellqaqksl 218
k+++q++q+N+++t+ L++q+ e++++q+++
VIMSS899405 212 KEHFQDQQFNFFITQndinhLTQQMVEFINSQQDA 246
**************99****************987 PP
Or compare VIMSS899405 to CDD or PaperBLAST