VIMSS899405 has 253 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.13
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-80 255.1 2.3 3.2e-80 254.9 2.3 1.0 1 VIMSS899405
Domain annotation for each sequence (and alignments):
>> VIMSS899405
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 254.9 2.3 3.2e-80 3.2e-80 1 218 [. 18 246 .. 18 247 .. 0.99
Alignments for each domain:
== domain 1 score: 254.9 bits; conditional E-value: 3.2e-80
DUF3053 1 llvllvvllLagCgdkekeqRkAFiefLqntvirs.gvklptlteeqkkafGdyasdYav.ltafsqqlsqavdtslepvldavsrirvpqdyvtqrd 96
++v+lv+++L+gC++k++++R+AF+e+L+++vi+s +v +++lt++q++afG+ya+dY+v l a++q+++++++t++e++++ v i++++d++++ +
VIMSS899405 18 VIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQVITSpVVGVCELTPAQRQAFGHYADDYDVlLAAYGQIFAVVYETGQEDKITGV--IQSERDNLVFLN 113
6899********************************************************899*********************..************ PP
DUF3053 97 elrqaagalnllaqqlqnakaqadaaraaLkqpddlkvvydkaydktVtapanaltrvipaaeslveqlvqvgdflqkqgdqvefegngiqv...... 188
elr a++++n+++ +l+n++++++++++aLk+p+d+k+v+d+a++ktVt++++++tr+++++ ++++qlv++g+flqkqg++v+fe+ng++v
VIMSS899405 114 ELRVARDVNNRFILRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVfadlaa 211
************************************************************************************************** PP
DUF3053 189 ktpqqasqyNkllte.....Laeqqqellqaqksl 218
k+++q++q+N+++t+ L++q+ e++++q+++
VIMSS899405 212 KEHFQDQQFNFFITQndinhLTQQMVEFINSQQDA 246
**************99****************987 PP
Or compare VIMSS899405 to CDD or PaperBLAST