VIMSS900525 has 380 amino acids
Query: DUF418 [M=163]
Accession: PF04235.18
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.7e-49 151.9 18.0 7.7e-49 151.9 18.0 2.3 2 VIMSS900525
Domain annotation for each sequence (and alignments):
>> VIMSS900525
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.1 0.8 0.085 0.085 20 68 .. 64 114 .. 39 135 .. 0.51
2 ! 151.9 18.0 7.7e-49 7.7e-49 1 162 [. 215 374 .. 215 375 .. 0.99
Alignments for each domain:
== domain 1 score: -1.1 bits; conditional E-value: 0.085
DUF418 20 llliglavglplalllallallgeessllslllevlsml...gglalalgyv 68
l+++++ +gl + l+ + + +++ +ll+ll+++ + g+++la+g+v
VIMSS900525 64 LFALLFGAGLQMLLPRG-KQWIQSRLTLLVLLGFIHALFfwdGDILLAYGLV 114
22333333333333333.2222222222222222222221114555555555 PP
== domain 2 score: 151.9 bits; conditional E-value: 7.7e-49
DUF418 1 lgrkgllkegekhkrllkrllliglavglplallla.llallgeessllslllevlsmlgglalalgyvalillllkkekrarllrplaavGRmALTn 97
l+r+g+lk g+ + r+++r+ ++++a+gl+++l+++ l++ l++ +++ + ll++ ++l++++++lgy+al+ ++++ +r rl+ ++a vGRmALTn
VIMSS900525 215 LMRSGWLK-GQYSLRHYRRTGALLVALGLMINLPAViLQWRLDWAYRWCAFLLQAPRELSAPLQTLGYAALMFGFWPQLSRCRLTLAIACVGRMALTN 311
69******.***************************************************************************************** PP
DUF418 98 YllqslvctlifygyglglfgslgraallllallifalqlllSklWlrrfrqGPlEwlwRkltyg 162
Yllq+++ct++f y++glf +++r++ll++++ ++a++ll+S +Wlr +rqGP+EwlwR+lt +
VIMSS900525 312 YLLQTIICTTLF--YQFGLFMEFNRLELLFFVVPVWAINLLFSVIWLRFWRQGPVEWLWRQLTLR 374
************..99**********************************************975 PP
Or compare VIMSS900525 to CDD or PaperBLAST