VIMSS902210 has 616 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-275 901.2 2.5 1.3e-275 901.0 2.5 1.0 1 VIMSS902210
Domain annotation for each sequence (and alignments):
>> VIMSS902210
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 901.0 2.5 1.3e-275 1.3e-275 2 542 .. 18 610 .. 17 611 .. 0.99
Alignments for each domain:
== domain 1 score: 901.0 bits; conditional E-value: 1.3e-275
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
aral++atG++d d++kPiiavvns+t++vPghvhl+dl+klv+e+iea+Ggvakefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++Da
VIMSS902210 18 ARALWRATGMTDSDFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEASGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADA 115
79************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
+v+is+CDki+PGmlma+lrlniP+i+vsGGpmeagktkls++i+++d+++a+++ a++k+s+++++++ersacPt+gsCsG+ftansm+cltealGl
VIMSS902210 116 MVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDDQSNQVERSACPTCGSCSGMFTANSMNCLTEALGL 213
************************************************************************************************** PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
s+Pg+++llat+a++k+l+ ++gkrivel+k++++ Pr+i++k+afena+tld+a+GGstntvLhlla+a+ea+++++++d+d+lsrkvP+l
VIMSS902210 214 SQPGNGSLLATHADRKQLFLNAGKRIVELTKRYYEqndesalPRNIANKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQL 311
************************************************************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...............................vdqd....vi 350
+k++Ps++k+ +ed+hraGGv ++l+eld++gll++++++v+G tl +tle+++++ +d+d +i
VIMSS902210 312 CKVAPSTQKYhMEDVHRAGGVLGILGELDRAGLLNRNVKNVLGLTLPQTLEQYDITVtqdeavkkmfragpagirttqafsqdcrwdsLDDDraagCI 409
*********99*******************************************99999****************************955555677** PP
TIGR00110 351 rsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkk 448
rsl+ +++k+gglavL+Gn+ae+G++vk+agv+++ilkf+Gpakv+es++ea+eailggkv eGdvvviryeGPkGgPGm+emL+Pts+l+++GLgk+
VIMSS902210 410 RSLEYAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDEAVEAILGGKVVEGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKA 507
************************************************************************************************** PP
TIGR00110 449 vaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyaklvssadk 537
+aLitDGrfsGgt+GlsiGhvsPeaa+gG+ial+edGD+i+iDi+nr ++l++se+e+a+rr++++++++ r+v++aL++ya+l++sadk
VIMSS902210 508 CALITDGRFSGGTSGLSIGHVSPEAASGGTIALIEDGDTIAIDIPNRSIQLQLSEAEIAARREAQEARGDkawtpknrqRQVSFALRAYASLATSADK 605
*******************************************************************999999*****9******************* PP
TIGR00110 538 Gavld 542
Gav+d
VIMSS902210 606 GAVRD 610
***98 PP
Or compare VIMSS902210 to CDD or PaperBLAST