PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS914454 to PF17412 (VraX)

VIMSS914454 has 59 amino acids

Query:       VraX  [M=55]
Accession:   PF17412.6
Description: Family of unknown function
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-43  131.9   1.8    2.7e-43  131.8   1.8    1.0  1  VIMSS914454  


Domain annotation for each sequence (and alignments):
>> VIMSS914454  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.8   1.8   2.7e-43   2.7e-43       1      55 []       1      55 [.       1      55 [. 0.99

  Alignments for each domain:
  == domain 1  score: 131.8 bits;  conditional E-value: 2.7e-43
         VraX  1 miiYRryieeGaPvYeiitktFktvsikCDesFsdteiykLLsLLedDvDnmkvs 55
                 miiYRr+ie+G+PvYeiitktFkt++ikCDe+F+++eiy+LLsLLe+DvDnm++s
  VIMSS914454  1 MIIYRRNIENGTPVYEIITKTFKTITIKCDETFNKYEIYQLLSLLENDVDNMPTS 55
                 9****************************************************98 PP



Or compare VIMSS914454 to CDD or PaperBLAST