VIMSS931374 has 301 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-26 79.3 0.0 6.4e-26 77.4 0.0 1.8 1 VIMSS931374
Domain annotation for each sequence (and alignments):
>> VIMSS931374
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 77.4 0.0 6.4e-26 6.4e-26 3 190 .. 136 287 .. 134 294 .. 0.86
Alignments for each domain:
== domain 1 score: 77.4 bits; conditional E-value: 6.4e-26
UPF0020 3 yRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekag 100
+R+++ ++L+ +LA+ +++l++ + + lDP+ G+GtilIEa +lg +++ g+D+d+++++ ++ N+ +
VIMSS931374 136 KRPYTRSGSLNVELARLMINLSRSR--SNVLDPFVGTGTILIEANWLGLKCI--------------------------GIDIDEQMIKNTKINLDYFH 205
79********************877..579**********************..........................*****************988 PP
UPF0020 101 vgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekaleeralrkvkeknvk 190
+ e+ ad L+ ++ ++ivt+pPYG++ + k l +LY++f e+++v+++ l++ t ++ + + l++ ++++k v+
VIMSS931374 206 YE--CELIHADTNTLPITR--SEAIVTDPPYGRSFTP-KGLSELYQNFFAEASNVTKN---LIFTTDSRFDWRDTLKSYGFKQIKIHTVY 287
76..566677777777334..568*********9976.56899***********9999...88888888888888888888888877665 PP
Or compare VIMSS931374 to CDD or PaperBLAST