VIMSS938401 has 380 amino acids
Query: DUF1297 [M=188]
Accession: PF06973.17
Description: Domain of unknown function (DUF1297)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.8e-85 269.3 0.0 1.1e-84 268.8 0.0 1.2 1 VIMSS938401
Domain annotation for each sequence (and alignments):
>> VIMSS938401
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 268.8 0.0 1.1e-84 1.1e-84 1 188 [] 189 380 .] 189 380 .] 0.99
Alignments for each domain:
== domain 1 score: 268.8 bits; conditional E-value: 1.1e-84
HHHHHHHHHHCTTSSSHHHHCCEEEEE---SEEEEEEEEEETTTTEEEEEEEEEEEEEECCCHCCS-HHHHHCCT-...---EEEEEEEEEEE-GGGH CS
DUF1297 1 dfkekleellekglieeedlkkasieeyvvGanfnlnyFysplkeevellgidrRyesnidglvrlpakqqlelel...epsyvvvGnipvvlREsll 95
+f+ek+e+l++ g+i+eedl ka+ie+y++G fn+++Fyspl+ee+ellgid+R+e+++dg+vrlpa+qql+l + ep+y+v+G+ + +lREsll
VIMSS938401 189 EFREKSERLMKLGVITEEDLAKARIERYIIGPVFNFDFFYSPLDEEIELLGIDWRFETSLDGHVRLPASQQLTLPEwqfEPEYTVTGHASSTLRESLL 286
799*********************************************************************9987778******************* PP
HHHHHHHHHHHHHHHHHSTT---EEEEEEEEE-TTS-EEEEEEESSB-GGGGGGTT.--CCHHHTTSS---HHHHHHHHHHHHHHCT-GGGCEE CS
DUF1297 96 ekvfelgekfveaakklvppGiiGpfcLqsvvtedlelvvfevsaRivggtnvyme.gspyskllfgepmsmGrriarEikeaiekdrleevvt 188
ekvf+++ek+vea+k+++ppGiiGpf+Lq++v++dl++++++v++R++ggtn++m+ g+py + l++++ms+Grr+a+Eik+aie d+le+vvt
VIMSS938401 287 EKVFDMAEKYVEATKRYYPPGIIGPFTLQTAVDKDLNFYIYDVAPRTGGGTNIHMAmGHPYGNALWRKEMSTGRRVALEIKRAIELDELEKVVT 380
*********************************************************************************************8 PP
Or compare VIMSS938401 to CDD or PaperBLAST