VIMSS938635 has 310 amino acids
Query: DUF1297 [M=188]
Accession: PF06973.17
Description: Domain of unknown function (DUF1297)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-46 143.6 0.0 3.8e-46 143.1 0.0 1.2 1 VIMSS938635
Domain annotation for each sequence (and alignments):
>> VIMSS938635
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 143.1 0.0 3.8e-46 3.8e-46 23 188 .] 158 310 .] 148 310 .] 0.95
Alignments for each domain:
== domain 1 score: 143.1 bits; conditional E-value: 3.8e-46
EEEEE---SEEEEEEEEEETTTTEEEEEEEEEEEEEECCCHCCS-HHHHHCCT----EEEEEEEEEEE-GGGHHHHHHHHHHHHHHHHHHSTT---EE CS
DUF1297 23 asieeyvvGanfnlnyFysplkeevellgidrRyesnidglvrlpakqqlelelepsyvvvGnipvvlREsllekvfelgekfveaakklvppGiiGp 120
++e+++ G+++++++Fysp+ e++ellg+d+R+ dg r+p k y++vGn ++ lREsll++++++g fv++ ++l+ppG+iGp
VIMSS938635 158 YRVERFIPGVYLYVHFFYSPILERLELLGVDERVLI-ADGNARWPVK-------PLPYTIVGNRAIALRESLLPQLYDYGLAFVRTMRELEPPGVIGP 247
589*******************************98.9*******99.......789***************************************** PP
EEEEEEE-TTS-EEEEEEESSB-GGGGGGTT--CCHHHTTSS---HHHHHHHHHHHHHHCT-GGGCEE CS
DUF1297 121 fcLqsvvtedlelvvfevsaRivggtnvymegspyskllfgepmsmGrriarEikeaiekdrleevvt 188
f+L +++ + ++ Ri+gg+n+ + ys+l++ge +smGrriarE++ a e+drleevvt
VIMSS938635 248 FALHFAYDG--SFKAIGIASRIDGGSNA---DHWYSELYWGERLSMGRRIARELRLAEEEDRLEEVVT 310
***998865..677789**********9...799*********************************8 PP
Or compare VIMSS938635 to CDD or PaperBLAST