VIMSS940469 has 471 amino acids
Query: DUF402 [M=68]
Accession: PF04167.18
Description: Protein of unknown function (DUF402)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.4e-23 67.3 3.2 5.4e-23 67.3 3.2 3.2 3 VIMSS940469
Domain annotation for each sequence (and alignments):
>> VIMSS940469
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.5 0.8 0.019 0.019 44 57 .. 46 59 .. 36 71 .. 0.72
2 ? 1.1 0.0 0.026 0.026 24 37 .. 105 118 .. 84 128 .. 0.81
3 ! 67.3 3.2 5.4e-23 5.4e-23 1 68 [] 376 443 .. 376 443 .. 0.97
Alignments for each domain:
== domain 1 score: 1.5 bits; conditional E-value: 0.019
EE-EEEEEEESEEE CS
DUF402 44 kyiDldLDvvvypd 57
+y D+d+D+ ++d
VIMSS940469 46 TYDDFDVDIYDKKD 59
89*******94433 PP
== domain 2 score: 1.1 bits; conditional E-value: 0.026
EEEEEEEEEES--E CS
DUF402 24 rfkgwYvniatppe 37
+ k++Yv++++ +
VIMSS940469 105 DEKYVYVDLGSAIG 118
579******99744 PP
== domain 3 score: 67.3 bits; conditional E-value: 5.4e-23
S-EEEEE-TT-SEEEEEEEETTTEEEEEEEEEES--EE..E.EEE-EEEEEEESEEE......-HHHH CS
DUF402 1 dlalwllplgewynvtkfldedgrfkgwYvniatppergegtvkyiDldLDvvvypdgevevlDedEl 68
d+a++ l g+w+ v++++d++g++kg Y ni+tp e++++ +y+Dl++D+v++pdg+ e++D +El
VIMSS940469 376 DYAITELEAGKWWFVHRYYDKNGNLKGEYYNINTPVEIYPDGARYVDLEVDIVKWPDGKKEIIDQEEL 443
6889999*******************************9977*************************8 PP
Or compare VIMSS940469 to CDD or PaperBLAST