VIMSS945544 has 613 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.1e-265 866.8 5.6 3.5e-265 866.6 5.6 1.0 1 VIMSS945544
Domain annotation for each sequence (and alignments):
>> VIMSS945544
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 866.6 5.6 3.5e-265 3.5e-265 2 542 .. 18 607 .. 17 608 .. 0.99
Alignments for each domain:
== domain 1 score: 866.6 bits; conditional E-value: 3.5e-265
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
aral++atG+k++d++kPiiavvns+t++vPghvhlkd+++lv+ eie+aGg+akefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++Da
VIMSS945544 18 ARALWRATGVKEDDFGKPIIAVVNSFTQFVPGHVHLKDMGQLVAGEIEKAGGIAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADA 115
79************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
+v+is+CDki+PGm+maa+rlniP+i+vsGGpmeagktkls++i+++d+++a+++ a++ +s++++e+iersacPt+gsCsG+ftansm+cltealGl
VIMSS945544 116 MVCISNCDKITPGMMMAAMRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPTVSDAQSEQIERSACPTCGSCSGMFTANSMNCLTEALGL 213
************************************************************************************************** PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
s+Pg++++lat+a++++l+ ++gkrivel+k++++ Pr+i+ ++afena++ld+a+GGs+ntvLhlla a+e ++++++ d+d++sr+vP+l
VIMSS945544 214 SQPGNGSMLATHADREQLFINAGKRIVELTKRYYEqddesalPRNIADRAAFENAMALDIAMGGSSNTVLHLLASAQEGEIDFDMGDIDEMSRRVPHL 311
************************************************************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdqdvi 350
+k++Ps+ k+ +ed+hraGGv+a+l+eld++gll+++++tv+G t++e+l+++++++ ++ +i
VIMSS945544 312 CKVAPSTPKYhMEDVHRAGGVMAILGELDRAGLLNNQTKTVLGLTMQEQLAQYDIMQtedeeilkffragpagirttkafsqdcrwdrldddRKEGCI 409
*******9999****************************************************************************966544444** PP
TIGR00110 351 rsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkk 448
r+++n++++egglavL Gn+a +G++vk+agv+e+ lkf+Gpa vfes++ a+e+ilggkvk+G+vvviryeGPkGgPGm+emL+Pt++l+++GLgk+
VIMSS945544 410 RTKENAFSQEGGLAVLSGNIAVDGCIVKTAGVDEENLKFQGPAIVFESQDSAVEGILGGKVKAGEVVVIRYEGPKGGPGMQEMLYPTTYLKSMGLGKA 507
************************************************************************************************** PP
TIGR00110 449 vaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea......revkgaLakyaklvssadkGav 540
+aL+tDGrfsGgt+GlsiGh sPeaa+gG+i+lv+dGD+i+iDi++r + l+v e el++rrak+++ ++ rev++aL++ya++++sadkGav
VIMSS945544 508 CALLTDGRFSGGTSGLSIGHASPEAASGGTIGLVNDGDIITIDIPSRSITLDVPESELQARRAKQDELGWkpvnrqREVSFALKAYASMATSADKGAV 605
******************************************************************99999999999********************* PP
TIGR00110 541 ld 542
+d
VIMSS945544 606 RD 607
98 PP
Or compare VIMSS945544 to CDD or PaperBLAST