VIMSS94685 has 280 amino acids
Query: DUF2544 [M=246]
Accession: PF11245.12
Description: Protein of unknown function (DUF2544)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-80 256.1 4.9 2.1e-80 255.8 4.9 1.1 1 VIMSS94685
Domain annotation for each sequence (and alignments):
>> VIMSS94685
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 255.8 4.9 2.1e-80 2.1e-80 1 246 [] 56 280 .] 56 280 .] 0.94
Alignments for each domain:
== domain 1 score: 255.8 bits; conditional E-value: 2.1e-80
DUF2544 1 lkiatpeavyvgeykssswllsghrkgeiltavswsgpepapkvklkdydqtvskaacknlpsnwrncgsytlevivsaeiesdyscpwlvsshivatt 99
++++tp v +g+y+s rkg++l+ swsg pap ++l dy +t + + c+++ + c ++t++v+v+++ +y+cpw++s + v+ +
VIMSS94685 56 VTVVTPGEVSYGQYNS-----N-ARKGDTLKLISWSGSGPAPTLVLTDYRRT-DTSNCPGINTRVFVCAYMTFNVTVESD---NYGCPWIASFYSVSEA 144
6889999999995544.....3.79************************987.889************************...********65555443 PP
DUF2544 100 fitneseaspggvtysgpdsrdsvcpkvsvdtydvswdenvvkkkklltldatggvvektlstylmkdgklcdsskldergaycrfvasgitltvlgcd 198
g ty++p +ds+cp ++v ++d+sw +n+v+++k l l++ g ++ tlstylm+ gklcd+s +d rgaycr v++ +t+t gcd
VIMSS94685 145 ---------FGFGTYTSPTVHDSICPTIPVASFDISWSDNYVSHNKALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCD 234
.........46679************************************************************************************* PP
DUF2544 199 kaevsvsavdhpitdkelhdivvavdtrsiqsgqidstcrfqyildel 246
+a+v+v++ + p+td++lhdivv+v+t+s ++ idstcrfqy+l+el
VIMSS94685 235 NAKVTVTPSRQPLTDRKLHDIVVQVNTSSREP--IDSTCRFQYVLNEL 280
********************************..*************8 PP
Or compare VIMSS94685 to CDD or PaperBLAST