VIMSS952320 has 284 amino acids
Query: DUF480 [M=149]
Accession: PF04337.18
Description: Protein of unknown function, DUF480
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-56 175.5 4.6 4.5e-56 175.3 1.1 2.0 2 VIMSS952320
Domain annotation for each sequence (and alignments):
>> VIMSS952320
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 175.3 1.1 4.5e-56 4.5e-56 1 149 [] 73 216 .. 73 216 .. 0.98
2 ! 3.9 0.1 0.0029 0.0029 70 134 .. 214 277 .. 213 282 .. 0.66
Alignments for each domain:
== domain 1 score: 175.3 bits; conditional E-value: 4.5e-56
B-HHHHHHHHHHHHHHHH-GGG-SEEHHHHHHHHT-SSS-SS-----HHHHHHHHHHHHHTTSEEEE..--SS--EEEE-HHHHHT--HHHHHHHHHH CS
DUF480 1 lsaveaRvlgvLiEKelttPdaYPLslnalvaacNqktsRdPvmeleesevqealdeLkkkklvseaseagsRvakyehrlaealklseaelavlall 98
l++++aRvlg+LiEKe+ttPdaYPL++na a+Nqkt+R+Pv++l++ v++al++L++ +lv+++ + sR+++yehrl ++l+l+++++a+++ l
VIMSS952320 73 LDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVVHHALRQLENLGLVRQQ--FCSRAERYEHRLGSVLDLTRQQVALIG-L 167
67899*************************************************************9..*************************98.6 PP
HHH-SB-HHHHHHHHTTTS--SSHHHHHHHHHHHHHT..TSEEEE---TT- CS
DUF480 99 lLRGpqtagelrtrseRlaefadveeveevLeelaereeplvvklprepGk 149
lLRGpqt gel +rseRla+fad+++v+++L++l++r l+++lpr++G+
VIMSS952320 168 LLRGPQTLGELYARSERLARFADTDDVRHHLDRLIQR--GLAAQLPRASGQ 216
79**********************************9..9********996 PP
== domain 2 score: 3.9 bits; conditional E-value: 0.0029
--SS--EEEE-HHHHHT--HHHHHHH.HHHHHH-SB-HHHHHHHHTTTS--SSHHHHHHHHHHHHH CS
DUF480 70 agsRvakyehrlaealklseaelavl.alllLRGpqtagelrtrseRlaefadveeveevLeelae 134
+g+R ++y h l+ +l++++ ++a a R ++el++r + l v++++++L++l++
VIMSS952320 214 SGQREDRYAHLLSGELDVEALQAATArAAQGARSGSDTSELEARVQSLEA--TVADMQDALAALQA 277
57899***********9999887754144455655556677777776653..45555555555554 PP
Or compare VIMSS952320 to CDD or PaperBLAST