VIMSS957164 has 304 amino acids
Query: SU10_MCP [M=292]
Accession: PF17236.8
Description: SU10 major capsid protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-85 273.2 1.0 1.8e-85 273.0 1.0 1.0 1 VIMSS957164
Domain annotation for each sequence (and alignments):
>> VIMSS957164
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 273.0 1.0 1.8e-85 1.8e-85 25 291 .. 10 301 .. 7 302 .. 0.96
Alignments for each domain:
== domain 1 score: 273.0 bits; conditional E-value: 1.8e-85
SU10_MCP 25 dtPllsligkgtkatstkheWqedelaapaadnaavEgadaptaeatprvrlsNytQIfkktvevSgtaqavkkagvgdelayqvakklkelkrdiEk 122
+tP++++ig+ t+a++t+ eWq+d+la+++a+n +vEgad ++++++p+vr++NytQI++k v+ S+t +av++ag+gde ayq+a++++elkrdiE+
VIMSS957164 10 ETPFVTAIGQ-TTAKNTYTEWQTDNLASANAQNKQVEGADLANESRQPTVRVGNYTQIMTKVVGTSTTDRAVHNAGRGDEHAYQLARAGQELKRDIEA 106
8*********.78***************8888****************************************************************** PP
SU10_MCP 123 alingtkadgss.a.tarktgGllafittnvs.....................taatdgtagaltedllndllqkvyeaGgnpktllvgakqkraisk 197
+ ++ +a +++ a +ar+t+G la++++n++ taat+g+a+ +te+ll+++l ++ +Gg+p++++++ k+k++ ++
VIMSS957164 107 RFTGNFAAIPGDgAvVARETAGALAWLRSNAHrgdgganpvmsggdngsgyptTAATTGKARLYTEALLKEVLGDIWVSGGQPNMVITSLKLKQTAAA 204
********7777457************999999***************************************************************** PP
SU10_MCP 198 fagdaertrnvg...ktlgvsvdvyetdfGtlnvvlnrvmpadtilvldpeylklaflrpffaeplaktGdaekgqivgEytLevrnekahgvitgl 291
f g a+++r++g ++ + +d+y++d G++++v++r+ ++ ++lv+dpey+++a+l+p++++ la+tG a++ +++E++L+++ne+a+gv+++l
VIMSS957164 205 FPGLASNRRDTGdqkARIIAGADIYVSDVGEVQFVPDRFCDNSSALVIDPEYWSVATLDPIQKRSLATTGLADRDALYTEIALRCHNEAASGVLADL 301
**97777777777989*******************************************************************************98 PP
Or compare VIMSS957164 to CDD or PaperBLAST