VIMSS958608 has 618 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-245 800.8 5.9 3.5e-245 800.6 5.9 1.0 1 VIMSS958608
Domain annotation for each sequence (and alignments):
>> VIMSS958608
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 800.6 5.9 3.5e-245 3.5e-245 2 542 .. 18 611 .. 17 612 .. 0.98
Alignments for each domain:
== domain 1 score: 800.6 bits; conditional E-value: 3.5e-245
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
ar+l++atG+k+ed++kPiiav+ns+t++vPghvhlkd+++lv+eeie+aGg+akefntia++DGiamgh+Gm+ysLpsre+iaDsve++v+ah++Da
VIMSS958608 18 ARSLWRATGVKNEDFGKPIIAVANSFTQFVPGHVHLKDMGQLVAEEIEKAGGIAKEFNTIAIDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADA 115
69************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
lv+is+CDki+PGmlma++rlniP+++vsGGpmeagk ++ +d+++a++ +a+++ s+ e+e ie++ac t+gsCsG+ftansm+cltealGl
VIMSS958608 116 LVCISNCDKITPGMLMASMRLNIPTVFVSGGPMEAGKAEVKGVKRALDLIDAMVIAADDHYSDGEVEVIEQTACATCGSCSGMFTANSMNCLTEALGL 213
***************************************87777789*************************************************** PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
s+Pg++++lat++++++l++k+g++iv++ + +++ Pr+i+t eafena++ld+a+GGstntvLhlla+a+e +v +++ d+drlsr+vP+l
VIMSS958608 214 SFPGNGSMLATHSDREQLFRKAGHTIVDMARSYYEqddaavlPRSIATLEAFENAMSLDIAMGGSTNTVLHLLAVAQEGNVPFTMADIDRLSRHVPCL 311
************************************************************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr....................................vdqdv 349
+k++P+ + v +ed+hraGGv+a+l++ld++gl+++ t+ tl+ l+ ++ r ++ v
VIMSS958608 312 CKVAPAKNDVhMEDVHRAGGVMAILGQLDRAGLINTSLRTIHSPTLGAALDAWDISRdscseeaqlfyraapggvptqkafsqssryealdtdREKGV 409
*******9999*********************************************9********************************88555555* PP
TIGR00110 350 irsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgk 447
irs++++++ +gglavL+Gnla+eG++vk+agv+e+ilkf+G+akv+es+e+a+++ilg +v++G+vv++ryeGPkGgPGm+emL+Pts+l++ GLgk
VIMSS958608 410 IRSKNHAFSTDGGLAVLFGNLAPEGSIVKTAGVDESILKFTGKAKVYESQEAAVAGILGNDVEAGEVVIVRYEGPKGGPGMQEMLYPTSYLKSKGLGK 507
************************************************************************************************** PP
TIGR00110 448 kvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyaklvssad 536
+aLitDGrfsGg++GlsiGhvsPeaaegG ialve GD+i iDi++r ++l+v+++ +a+r+a++++k+a r ++ aL++ya l ++a
VIMSS958608 508 LCALITDGRFSGGSSGLSIGHVSPEAAEGGLIALVETGDTIVIDIPERIIHLDVDDAVIADRHARMEAKGAaawkpqnrnRPISSALKAYAALTTNAA 605
********************************************************************999999999999999*************** PP
TIGR00110 537 kGavld 542
+Gav+d
VIMSS958608 606 RGAVRD 611
****97 PP
Or compare VIMSS958608 to CDD or PaperBLAST