VIMSS96174 has 616 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-277 907.1 2.7 2.1e-277 906.9 2.7 1.0 1 VIMSS96174
Domain annotation for each sequence (and alignments):
>> VIMSS96174
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 906.9 2.7 2.1e-277 2.1e-277 2 542 .. 18 610 .. 17 611 .. 0.99
Alignments for each domain:
== domain 1 score: 906.9 bits; conditional E-value: 2.1e-277
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDal 100
aral++atG++d+d++kPiiavvns+t++vPghvhl+dl+klv+e+ieaaGgvakefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++Da+
VIMSS96174 18 ARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAM 116
79************************************************************************************************* PP
TIGR00110 101 vvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGlsl 199
v+is+CDki+PGmlma+lrlniP+i+vsGGpmeagktkls++i+++d+++a+++ a++k+s+++++++ersacPt+gsCsG+ftansm+cltealGls+
VIMSS96174 117 VCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQ 215
*************************************************************************************************** PP
TIGR00110 200 Pgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllakl 291
Pg+++llat++++k+l+ ++gkrivel+k++++ Pr+i++k+afena+tld+a+GGstntvLhlla+a+ea+++++++d+d+lsrkvP+l+k+
VIMSS96174 216 PGNGSLLATHSDRKQLFLNAGKRIVELTKRYYEqndesalPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKV 314
*************************************************************************************************** PP
TIGR00110 292 kPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr.................................vdqd....virs 352
+Ps++k+ +ed+hraGGv+++l+eld++gll++d+++v+G tl +tle+++v+ d +irs
VIMSS96174 315 APSTQKYhMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLtqddavknmfragpagirttqafsqdcrwdtldD--DrangCIRS 411
******99*********************************************99*****************************9651..44566**** PP
TIGR00110 353 ldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaL 451
l+++++k+gglavL+Gn+ae+G++vk+agv+++ilkf+Gpakv+es+++a+eailggkv +GdvvviryeGPkGgPGm+emL+Pts+l+++GLgk++aL
VIMSS96174 412 LEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKACAL 510
*************************************************************************************************** PP
TIGR00110 452 itDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyaklvssadkGavl 541
itDGrfsGgt+GlsiGhvsPeaa+gG+i+l+edGD i+iDi+nr ++l+vs++ela+rr++++++++ r++++aL++ya+l++sadkGav+
VIMSS96174 511 ITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELAARREAQEARGDkawtpknreRQISFALRAYASLATSADKGAVR 609
****************************************************************999999****999*********************9 PP
TIGR00110 542 d 542
d
VIMSS96174 610 D 610
8 PP
Or compare VIMSS96174 to CDD or PaperBLAST